ade:Gene Product(s): Difference between revisions

Standard name	Ade product
Synonyms	cryptic adenine deaminase product^[1], B3665 product^[2]^[1], Adu product^[2]^[1], Ade product^[2]^[1], YicP product^[2]^[1]
Product description	cryptic adenine deaminase monomer^[2]^[3]; Component of ; cryptic adenine deaminase^[3]
EC number (for enzymes)	3.5.4.2^[1]
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Notes

Function

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Gene Ontology

Qualifier	GO ID	GO term name	Aspect	Notes	Status
	GO:0005737	cytoplasm	C	Seeded from Riley et al 2006 ^[1].	required fields missing
	GO:0008152	metabolic process	P	Seeded from EcoCyc 11.1^[3].	required fields missing
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Interactions

Partner Type	Partner	Notes
Protein	Subunits of cryptic adenine deaminase	could be indirect
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Notes

Localization

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MNNSINHKFH HISRAEYQEL LAVSRGDAVA DYIIDNVSIL DLINGGEISG PIVIKGRYIA GVGAEYTDAP ALQRIDARGA TAVPGFIDAH LHIESSMMTP VTFETATLPR GLTTVICDPH EIVNVMGEAG FAWFARCAEQ ARQNQYLQVS SCVPALEGCD VNGASFTLEQ MLAWRDHPQV TGLAEMMDYP GVISGQNALL DKLDAFRHLT LDGHCPGLGG KELNAYITAG IENCHESYQL EEGRRKLQLG MSLMIREGSA ARNLNALAPL INEFNSPQCM LCTDDRNPWE IAHEGHIDAL IRRLIEQHNV PLHVAYRVAS WSTARHFGLN HLGLLAPGKQ ADIVLLSDAR KVTVQQVLVK GEPIDAQTLQ AEESARLAQS APPYGNTIAR QPVSASDFAL QFTPGKRYRV IDVIHNELIT HSHSSVYSEN GFDRDDVSFI AVLERYGQRL APACGLLGGF GLNEGALAAT VSHDSHNIVV IGRSAEEMAL AVNQVIQDGG GLCVVRNGQV QSHLPLPIAG LMSTDTAQSL AEQIDALKAA ARECGPLPDE PFIQMAFLSL PVIPALKLTS QGLFDGEKFA FTTLEVTE
Mol. Wt	63.74 kDa (calc) ^[2]
pI
Extinction coefficient	41370 - 42745 (calc based on 13 Y, 4 W, and 11 C residues)
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structure Type	Organism	Accession	Residues covered	Notes
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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:EG11692-MONOMER
UniProt (EcoliWiki Page)	UniProt:P31441
PFAM (EcoliWiki Page)	PFAM:PF01979
RefSeq (EcoliWiki Page)	RefSeq:NP_418121
ModBase (EcoliWiki Page)	ModBase:P31441
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] 3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[1]

[2]

[3]

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 {{Tab|Quickview|ade}}{{Tab|Gene|ade}}{{Tab On|Gene Product(s)|ade}}{{Tab|Expression|ade}}{{Tab|Evolution|ade}}{{Tab|On One Page|ade}}{{TabsBottom}}
@@ Line 16: / Line 25: @@
 |{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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 ==Nomenclature==
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@@ Line 28: / Line 37: @@
 !{{table heading style}} |Synonyms
 |
-cryptic adenine deaminase<ref name='LIB:Riley_2006'/>, B3665<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Adu<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ade<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YicP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+cryptic adenine deaminase product<ref name='LIB:Riley_2006'/>, B3665 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Adu product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ade product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YicP product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
 |-
 !{{table heading style}} |Product description
 |
-cryptic adenine deaminase monomer<ref name='LIB:EcoCyc10.6'/>; cryptic adenine deaminase monomer<ref name='LIB:EcoCyc11.1'/>; Component of [[:Category:Complex:cryptic adenine deaminase|cryptic adenine deaminase]]<ref name='LIB:EcoCyc11.1'/>; cryptic adenine deaminase<ref name='LIB:EcoCyc11.1'/>
+cryptic adenine deaminase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
+Component of ; [[:Category:Complex:cryptic adenine deaminase|cryptic adenine deaminase]]<ref name='LIB:EcoCyc11.1'/>
 |-
 !{{table heading style}} |EC number (for enzymes)
 |
-*[http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.5.4.2 3.5.4.2]<ref name='LIB:Riley_2006'/>
+** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.5.4.2 3.5.4.2]<ref name='LIB:Riley_2006'/>
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 {{Product_nomenclature_help}}
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@@ Line 48: / Line 59: @@
 ==Function==
+{{BacktoTop}}
 <protect>
-===Gene Ontology===
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 required fields missing
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 {{Product_GO_help}}
-===Interactions===
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 could be indirect
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 {{Product_interactions_help}}
 <!--Function_notes--></protect>
 ===Notes===
 ==Localization==
+<!--box uid=421aa90e079fa326b6494f812ad13e79.27903.W46a886ae19e15-->
+<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
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 ===Notes===
 ==Structure and Physical Properties==
+{{BacktoTop}}
 <protect>
-===Physical Properties===
+<span id="Sequence"></span><big>'''Physical Properties'''</big>
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@@ Line 157: / Line 182: @@
 - 42745 (calc based on 13 Y, 4 W, and 11 C residues)
 |-
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 {{Product_physical_properties_help}}
-===Domains/Motifs/Modification Sites===
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 {{Product_domains_motifs_help}}
-===Structure===
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+<!--box uid=421aa90e079fa326b6494f812ad13e79.27903.R46a886afb21dd-->
+<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
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 <!--Structure_notes--></protect>
@@ Line 180: / Line 215: @@
 ==Gene Product Resources==
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+{{BacktoTop}}
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 <!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
-{|class = 'sortable' {{Prettytable}} id='58217'
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 ===Notes===
 ==Accessions in Other Databases==
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 <!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
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@@ Line 244: / Line 282: @@
 ==Links==
+{{BacktoTop}}
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+{{Links_help}}
+<noinclude>
-<noinclude>
 ==References==
+{{BacktoTop}}
 {{RefHelp}}
 <references/>
 __NOTOC__
-[[Category:GO:0005737]][[Category:GO:0008152]][[Category:Complex:cryptic adenine deaminase]]</noinclude>
+</noinclude>

ade:Gene Product(s): Difference between revisions

Revision as of 19:26, 28 July 2007

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

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