rpoS:Expression: Difference between revisions

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===Notes===
===Notes===
Note: This image from RegulonDB is wrong. ''nlpD'' should begin just downstream of the ''nlpD''<sub>p1</sub> and ''nlpD''<sub>p2</sub> promoters. See Figure 2 of (Hengge-Aronis, 2002)<ref name='PMID:12208995'/> ; see also EcoCyc entry.
Note: This image from RegulonDB is wrong. ''nlpD'' should begin just downstream of the ''nlpD''<sub>p1</sub> and ''nlpD''<sub>p2</sub> promoters. See Figure 2 of (Hengge-Aronis, 2002)<ref name='PMID:12208995'/> ; see also the ''rpoS'' [http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10510 EcoCyc entry].


==Translation and Regulation of Translation==
==Translation and Regulation of Translation==

Revision as of 02:32, 8 November 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Transcription and Transcriptional Regulation

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Transcription unit(s)

rpoS

nlpD-rpoS

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Figure courtesy of RegulonDB

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Notes

Note: This image from RegulonDB is wrong. nlpD should begin just downstream of the nlpDp1 and nlpDp2 promoters. See Figure 2 of (Hengge-Aronis, 2002)[1] ; see also the rpoS EcoCyc entry.

Translation and Regulation of Translation

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gbrowse_img.php?coord=2865553..2865593&genome=ecoli&name=MG1655&trackset=Genes_unlabeled+DNA_unlabeled+flip&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression

Allele Name Mutation Phenotype Reference
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See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Expression Studies

Type Reference Notes

microarray

EcoliGenExpDB:b2741 (EcoliWiki Page)

Summary of data for rpoS from multiple microarray studies

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Expression Resources

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to rpoS Expression

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10510

EchoBASE (EcoliWiki Page)

EchoBASE:EB0505

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2741

EcoGene (EcoliWiki Page)

EcoGene:EG10510

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Notes

Links

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Name URL Comments
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References

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  1. ↑ Hengge-Aronis, R (2002) Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol. Mol. Biol. Rev. 66 373-95, table of contents PubMed


Categories

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