rpoS:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT2G36990 (score: 1.000; bootstrap: 76%)
  • AT1G08540 (score: 0.108)

From Inparanoid:20070104

Oryza gramene

  • Q53JE7 (score: 1.000; bootstrap: 98%)
  • Q53KH8 (score: 1.000; bootstrap: 98%)
  • Q7XXT0 (score: 0.998)
  • Q9ZPL2 (score: 0.696)
  • Q53KH7 (score: 0.568)
  • Q84Q84 (score: 0.471)
  • Q9ZPL1 (score: 0.400)
  • Q84LK8 (score: 0.059)
  • Q8RWR8 (score: 0.052)
  • Q9ZPL0 (score: 0.050)
  • Q6L565 (score: 0.050)
  • Q6I5E7 (score: 0.050)

From Inparanoid:20070104

E. coli O157

RPOS

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF04542 Sigma-70 region 2

Pfam (EcoliWiki Page)

PF04545 Sigma-70, region 4

Superfamily (EcoliWiki Page)

SUPERFAMILY:88659

Superfamily (EcoliWiki Page)

SUPERFAMILY:88659

Superfamily (EcoliWiki Page)

SUPERFAMILY:88946

Pfam (EcoliWiki Page)

PF00140 Sigma-70 factor, region 1.2

Pfam (EcoliWiki Page)

PF04539 Sigma-70 region 3

EcoCyc

EcoCyc:EG10510

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10510

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000503

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0505

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009001

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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