fabF:Gene Product(s): Difference between revisions

Standard name	FabF product
Synonyms	3-oxoacyl-[acyl-carrier-protein] synthase II product^[1], B1095 product^[2]^[1], Vtr product^[2]^[1], Cvc product^[2]^[1], VtrB product^[2]^[1], FabJ product^[2]^[1], FabF product^[2]^[1]
Product description	FabF^[2]^[3]; Component of ; 3-oxoacyl-ACP synthase II^[2]
EC number (for enzymes)	2.3.1.41^[1]
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Notes

Function

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Gene Ontology

Qualifier	GO ID	GO term name	Aspect	Notes	Status
	GO:0005737	cytoplasm	C	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0006654	phosphatidic acid biosynthetic process	P	Seeded from EcoCyc 11.1^[3].	required fields missing
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Interactions

Partner Type	Partner	Notes
Protein	Subunits of 3-oxoacyl-ACP synthase II	could be indirect
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Notes

Localization

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MSKRRVVVTG LGMLSPVGNT VESTWKALLA GQSGISLIDH FDTSAYATKF AGLVKDFNCE DIISRKEQRK MDAFIQYGIV AGVQAMQDSG LEITEENATR IGAAIGSGIG GLGLIEENHT SLMNGGPRKI SPFFVPSTIV NMVAGHLTIM YGLRGPSISI ATACTSGVHN IGHAARIIAY GDADVMVAGG AEKASTPLGV GGFGAARALS TRNDNPQAAS RPWDKERDGF VLGDGAGMLV LEEYEHAKKR GAKIYAELVG FGMSSDAYHM TSPPENGAGA ALAMANALRD AGIEASQIGY VNAHGTSTPA GDKAEAQAVK TIFGEAASRV LVSSTKSMTG HLLGAAGAVE SIYSILALRD QAVPPTINLD NPDEGCDLDF VPHEARQVSG MEYTLCNSFG FGGTNGSLIF KKI
Mol. Wt	43.05 kDa (calc) ^[2]
pI
Extinction coefficient	25900 - 26400 (calc based on 10 Y, 2 W, and 4 C residues)
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structure Type	Organism	Accession	Residues covered	Notes
X-RAY DIFFRACTION	Escherichia coli	1KAS BETA-KETOACYL-ACP SYNTHASE II FROM ESCHERICHIA COLI
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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:3-OXOACYL-ACP-SYNTHII-MONOMER
UniProt (EcoliWiki Page)	UniProt:P0AAI5
PFAM (EcoliWiki Page)	PFAM:PF00109
RefSeq (EcoliWiki Page)	RefSeq:NP_415613
PDB (EcoliWiki Page)	PDB:1KAS
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 ^1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 ^2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 ^1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 ^2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] 3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[1]

[2]

[3]

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 <noinclude>{{TabsTop}}
 {{Tab|Quickview|fabF}}{{Tab|Gene|fabF}}{{Tab On|Gene Product(s)|fabF}}{{Tab|Expression|fabF}}{{Tab|Evolution|fabF}}{{Tab|On One Page|fabF}}{{TabsBottom}}
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 |{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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 ==Nomenclature==
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 !{{table heading style}} |Synonyms
 |
--oxoacyl-[acyl-carrier-protein] synthase II<ref name='LIB:Riley_2006'/>, B1095<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Vtr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cvc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VtrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FabJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FabF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+-oxoacyl-[acyl-carrier-protein] synthase II product<ref name='LIB:Riley_2006'/>, B1095 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Vtr product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cvc product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VtrB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FabJ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FabF product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
 |-
 !{{table heading style}} |Product description
 |
-FabF<ref name='LIB:EcoCyc10.6'/>; FabF<ref name='LIB:EcoCyc11.1'/>; Component of [[:Category:Complex:3-oxoacyl-ACP synthase II|3-oxoacyl-ACP synthase II]]<ref name='LIB:EcoCyc10.6'/>
+FabF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
+Component of ; [[:Category:Complex:3-oxoacyl-ACP synthase II|3-oxoacyl-ACP synthase II]]<ref name='LIB:EcoCyc10.6'/>
 |-
 !{{table heading style}} |EC number (for enzymes)
 |
-*[http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41]<ref name='LIB:Riley_2006'/>
+** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41]<ref name='LIB:Riley_2006'/>
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@@ Line 48: / Line 59: @@
 ==Function==
+{{BacktoTop}}
 <protect>
-===Gene Ontology===
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 could be indirect
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 ===Notes===
 ==Localization==
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 ===Notes===
 ==Structure and Physical Properties==
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 <protect>
-===Physical Properties===
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@@ Line 198: / Line 225: @@
 ==Gene Product Resources==
-<!--box uid=421aa90e079fa326b6494f812ad13e79..R469fd387a16af-->
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 ===Notes===
 ==Accessions in Other Databases==
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 ==Links==
+{{BacktoTop}}
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-<noinclude>
 ==References==
+{{BacktoTop}}
 {{RefHelp}}
 <references/>
 __NOTOC__
-[[Category:GO:0005737]][[Category:GO:0006654]][[Category:Complex:3-oxoacyl-ACP synthase II]]</noinclude>
+</noinclude>

fabF:Gene Product(s): Difference between revisions

Revision as of 09:55, 28 July 2007

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

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