Microbes Online: Difference between revisions
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'''You can help [[EcoliWiki]] by editing the content of this page. For information about obtaining editing privileges, see [[EcoliWiki:Membership]]''' | '''You can help [[EcoliWiki]] by editing the content of this page. For information about obtaining editing privileges, see [[EcoliWiki:Membership]]''' | ||
[[Category:Databases]] | [[Category:Databases]] | ||
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=About {{PAGENAME}}= | ==About {{PAGENAME}}== | ||
[http://www.microbesonline.org/ {{PAGENAME}}] is a database that describes the potential functions of genes. It has comparative studies on over 300 prokaryotic genomes. | [http://www.microbesonline.org/ {{PAGENAME}}] is a database that describes the potential functions of genes. It has comparative studies on over 300 prokaryotic genomes. | ||
=Content= | ==Content== | ||
MicrobesOnline<ref name='PMID=15998914'>PMID:15998914</ref> describes several features of genes: the potential functions, the evolutionary history, gene expxression data as well as enzyme classification and the gene ontology. Further, operon and regulon predictions with KEGG metabolic pathway information is integrated into the database. | MicrobesOnline<ref name='PMID=15998914'>PMID:15998914</ref> describes several features of genes: the potential functions, the evolutionary history, gene expxression data as well as enzyme classification and the gene ontology. Further, operon and regulon predictions with KEGG metabolic pathway information is integrated into the database. | ||
=Using {{PAGENAME}}= | ==Using {{PAGENAME}}== | ||
==Browsing== | ===Browsing=== | ||
==Searching== | ===Searching=== | ||
Searching for a gene can be done by entering the name of the gene in the search box. The gene can be searched in multiple genomes. The genomes are selected by adding them to the genome selected box. | Searching for a gene can be done by entering the name of the gene in the search box. The gene can be searched in multiple genomes. The genomes are selected by adding them to the genome selected box. | ||
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Genes of interested can be added to the shopping cart. | Genes of interested can be added to the shopping cart. | ||
==Usage examples== | ===Usage examples=== | ||
''Add links to additional pages describing success stories here.'' | ''Add links to additional pages describing success stories here.'' | ||
=Other sites with related content= | ==Other sites with related content= | ||
=Technology= | ==Technology== | ||
==Web Services/API== | ===Web Services/API=== | ||
=Discussion= | ==Discussion== | ||
=References= | ==References== | ||
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<references/> | <references/> | ||
=External Links= | ==External Links== | ||
[http://www.microbesonline.org/ {{PAGENAME}}] | [http://www.microbesonline.org/ {{PAGENAME}}] | ||
==Discussion of {{PAGENAME}} on other websites== | ==Discussion of {{PAGENAME}} on other websites== | ||
Revision as of 04:22, 2 June 2009
Microbes_Online You can help EcoliWiki by editing the content of this page. For information about obtaining editing privileges, see EcoliWiki:Membership
| Link/URL: |
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| What: |
| Who: |
| Updates: |
| Upcoming events: |
| Web Services: |
| edit table |
| Microbes Online | |
| Who: | Adam Arkin |
| What: | short description |
| Where: | Microbes Online |
| Updates | |
| Upcoming events | link to event calendar, if applicable |
| Web Services | |
About Microbes Online
Microbes Online is a database that describes the potential functions of genes. It has comparative studies on over 300 prokaryotic genomes.
Content
MicrobesOnline[1] describes several features of genes: the potential functions, the evolutionary history, gene expxression data as well as enzyme classification and the gene ontology. Further, operon and regulon predictions with KEGG metabolic pathway information is integrated into the database.
Using Microbes Online
Browsing
Searching
Searching for a gene can be done by entering the name of the gene in the search box. The gene can be searched in multiple genomes. The genomes are selected by adding them to the genome selected box.
In the search results, there will be headings of the following: Gene info, operon and regulon, domains, homologs, sequences, tree browser and a genome browser. If available, COG, InterPro and GO information will follow.
Genes of interested can be added to the shopping cart.
Usage examples
Add links to additional pages describing success stories here.
Technology
Web Services/API
Discussion
References
See Help:References for how to manage references in EcoliWiki.
- ↑ PMID:15998914