cbpM:Gene Product(s): Difference between revisions

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!align=left {{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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17 Da
11.511 kDa
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!align=left {{table heading style}} |pI
!align=left {{table heading style}} |pI
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6.1 (calculated)
4.4 (calculated)
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!align=left {{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
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0 (calc based on 0 Y, 0 W, and 0 C residues)
11,000 - 11,125 (calc based on 0 Y, 2 W, and 1 C residues)


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Latest revision as of 20:33, 17 February 2015

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

CbpM

Synonyms

modulator of CbpA co-chaperone[1], B0999[2][1], YccD[2][1], CbpM[2][1] , ECK0990, JW0984, yccD, b0999

Product description

chaperone-modulator protein CbpM[2][3]

Modulator of CbpA co-chaperone activity[4]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

cbpA

PMID:19402753[5]

LCMS(ID Probability):99.2 MALDI(Z-score):39.044295

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MANVTVTFTI TEFCLHTGIS EEELNEIVGL GVVEPREIQE TTWVFDDHAA IVVQRAVRLR
HELALDWPGI AVALTLMDDI AHLKQENRLL RQRLSRFVAH P
Length

101

Mol. Wt

11.511 kDa

pI

4.4 (calculated)

Extinction coefficient

11,000 - 11,125 (calc based on 0 Y, 2 W, and 1 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=cbpM taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128965

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945597

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003377

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P63264

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12194

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12194

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945597

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002083

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2111

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed

Categories

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