rhsE:Evolution: Difference between revisions

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[[EcoCyc]]
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EcoCyc:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000008
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:32, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000009783 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000039755 (score: 0.704)
  • ENSBTAP00000036826 (score: 0.689)
  • ENSBTAP00000018431 (score: 0.501)
  • ENSBTAP00000034908 (score: 0.091)
  • YP_026224 (score: 1.000; bootstrap: 100%)
  • YP_026234 (score: 0.073)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000017541 (score: 1.000; bootstrap: 100%)
  • YP_026224 (score: 0.856)
  • YP_026234 (score: 0.086)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000009228 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000005061 (score: 0.735)
  • ENSMODP00000005751 (score: 0.678)
  • ENSMODP00000018654 (score: 0.620)
  • YP_026224 (score: 1.000; bootstrap: 100%)
  • YP_026234 (score: 0.087)

From Inparanoid:20070104

Mus musculus

  • MGI:1345183 (score: 1.000; bootstrap: 100%)
  • MGI:2447063 (score: 0.698)
  • MGI:1345184 (score: 0.693)
  • MGI:1345185 (score: 0.609)
  • YP_026224 (score: 1.000; bootstrap: 100%)
  • YP_026234 (score: 0.080)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000003591 (score: 1.000; bootstrap: 69%)
  • YP_026224 (score: 0.848)

From Inparanoid:20070104

Shigella flexneri

RHS-LIKE

From SHIGELLACYC

E. coli O157

Z0272

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03527 RHS protein

Pfam (EcoliWiki Page)

PF05593 RHS Repeat

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000008

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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