dxs:Evolution: Difference between revisions

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[http://pfam.janelia.org/family/PF02779 PF02779  Transketolase, pyrimidine binding domain]
[http://pfam.janelia.org/family/PF02779 PF02779  Transketolase, pyrimidine binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02780 PF02780  Transketolase, C-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02780 PF02780 Transketolase, C-terminal domain]   
[http://pfam.janelia.org/family/PF00676 PF00676 Dehydrogenase E1 component]   
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Revision as of 19:09, 26 October 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G15560 (score: 1.000; bootstrap: 100%)
  • AT3G21500 (score: 0.544)
  • AT5G11380 (score: 0.202)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0229442 (score: 1.000; bootstrap: 100%)
  • DDB0230185 (score: 0.245)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11252-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6I573 (score: 1.000; bootstrap: 100%)
  • Q5TKB6 (score: 0.993)
  • O22567 (score: 0.728)
  • Q6YU51 (score: 0.566)
  • Q58I00 (score: 0.431)
  • Q58I01 (score: 0.135)
  • Q5VSB8 (score: 0.104)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR221C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC30D103c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

DXS

From SHIGELLACYC

E. coli O157

DXS

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02779 Transketolase, pyrimidine binding domain

Pfam (EcoliWiki Page)

PF02780 Transketolase, C-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52922

Panther (EcoliWiki Page)

PTHR11624:SF20

Pfam (EcoliWiki Page)

PF00676 Dehydrogenase E1 component



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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