yebA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yebA'' | ''yebA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1857, b1856, JW5304, yebA'''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK1857, b1856, JW5304, yebA'''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Putative metalloprotease, function unknown; M37 family<ref name='LIB:EcoGene'/> | Putative metalloprotease, function unknown; M37 family<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted peptidase<ref name='LIB:Riley_2006'/>, YebA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1856<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted peptidase<ref name='LIB:Riley_2006'/>, YebA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1856<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0000920 cell separation during cytokinesis ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0001896 autolysis ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): | transcription unit(s): | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yebA&loc=MG1655:1939659..1938337,W3110:1943349..1942027,DH10B:2030230..2028908,REL606:1920148..1918889 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1920148&end=1918889&gene=yebA&aa=mlgsltvltlavavwrpyvyhrdatpivktieleqneirsllpeasepidqaaqedeaipqdelddkiageagvheyvvstgdtlssilnqygidmgditqlaaadkelrnlkigqqlswtltadgelqrltwevsrretrtydrtaangfkmtsemqqgewvnnllkgtvggsfvasarnagltsaevsavikamqwqmdfrklkkgdefavlmsremldgkreqsqllgvrlrsegkdyyairaedgkfydrngtglakgflrfptakqfrissnfnprrtnpvtgrvaphrgvdfampqgtpvlsvgdgevvvakrsgaagyyvairhgrsyttrymhlrkilvkpgqkvkrgdrialsgntgrstgphlhyevwinqqavnpltaklprtegltgsdrreflaqakeivpqlrfd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yebA+AND+escherichia+coli Pubmed(yebA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yebA Textpresso(yebA)] | |||
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Revision as of 23:09, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yebA |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Putative metalloprotease, function unknown; M37 family[4] |
| Product Synonyms(s) | |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
NlpD, YgeR, YebA and EnvC are paralogs. SwissProt predicts a 34 aa type I signal peptide that cannot be confirmed using SignalP.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.