ubiA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''ubiA''  
''ubiA''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK4032, b4040, JW4000, cyr, sdgG?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK4032, b4040, JW4000, cyr, sdgG?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
4OHBENZOATE-
4OHBENZOATE-
4-Hydroxybenzoate polyprenyltransferase<ref name='LIB:EcoGene'/>
4-Hydroxybenzoate polyprenyltransferase<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
p-hydroxybenzoate octaprenyltransferase<ref name='LIB:Riley_2006'/>, B4040<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cyr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 4-HB polyprenyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
p-hydroxybenzoate octaprenyltransferase<ref name='LIB:Riley_2006'/>, B4040<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cyr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 4-HB polyprenyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Cellular Component'''
* GO:0016021 integral to membrane ([http://www.geneontology.org/GO.evidence.shtml ISS])
'''Molecular Function'''
* GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008412 4-hydroxybenzoate octaprenyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006744 ubiquinone biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:ubiCA|ubiCA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ubiCA|ubiCA]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ubiA&loc=MG1655:4251039..4251911,W3110:4256606..4257478,DH10B:4350735..4351607,REL606:4231948..4232820 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4231948&end=4232820&gene=ubiA&aa=mewsltqnkllafhrlmrtdkpigallllwptlwalwvatpgvpqlwilavfvagvwlmraagcvvndyadrkfdghvkrtanrplpsgavtekearalfvvlvlisfllvltlntmtillsiaalalawvypfmkrythlpqvvlgaafgwsipmafaavsesvplscwlmflanilwavaydtqyamvdrdddvkigikstailfgqydkliigilqigvlalmaiigelnglgwgyywsilvagalfvyqqklianrereacfkafmnnnyvglvlflglamsywhf Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ubiA+AND+escherichia+coli Pubmed(ubiA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ubiA Textpresso(ubiA)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 23:26, 21 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ubiA

Gene Synonym(s)

ECK4032, b4040, JW4000, cyr, sdgG?[1][2]

Product Desc.

4OHBENZOATE- 4-Hydroxybenzoate polyprenyltransferase[3]

Product Synonyms(s)

p-hydroxybenzoate octaprenyltransferase[1], B4040[2][1], Cyr[2][1], UbiA[2][1], 4-HB polyprenyltransferase[2][1]

Function from GO

Cellular Component

Molecular Function

  • GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups (IDA)
  • GO:0008412 4-hydroxybenzoate octaprenyltransferase activity (IDA)

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ubiCA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ubiA)    Textpresso(ubiA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]





References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ubiA:Quickview&oldid=1030448"