typA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''typA'' | ''typA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''bipA, ECK3864, b3871, JW5571, yihK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''bipA, ECK3864, b3871, JW5571, yihK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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protein possibly involved in LPS biosynthesis and host colonization<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | protein possibly involved in LPS biosynthesis and host colonization<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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GTPase, regulatory, ribosome-associated; phosphorylated protein involved in global gene regulation; non-essential gene<ref name='LIB:EcoGene'/> | GTPase, regulatory, ribosome-associated; phosphorylated protein involved in global gene regulation; non-essential gene<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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GTP-binding protein<ref name='LIB:Riley_2006'/>, B3871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BipA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TypA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | GTP-binding protein<ref name='LIB:Riley_2006'/>, B3871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BipA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TypA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Biological Process''' | |||
* GO:0009409 response to cold ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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failure to grow at low temperatures<ref name='PMID:11683274'/> | failure to grow at low temperatures<ref name='PMID:11683274'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:bipA|bipA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:bipA|bipA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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test2 | test2 | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=typA&loc=MG1655:4056430..4058253,W3110:3578274..3576451,REL606:4036665..4038488 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4036665&end=4038488&gene=typA&aa=mieklrniaiiahvdhgkttlvdkllqqsgtfdsraetqervmdsndlekergitilakntaikwndyrinivdtpghadfggevervmsmvdsvllvvdafdgpmpqtrfvtkkafayglkpivvinkvdrpgarpdwvvdqvfdlfvnldatdeqldfpivyasalngiagldhedmaedmtplyqaivdhvpapdvdldgpfqmqisqldynsyvgvigigrikrgkvkpnqqvtiidsegktrnakvgkvlghlglerietdlaeagdivaitglgelnisdtvcdtqnvealpalsvdeptvsmffcvntspfcgkegkfvtsrqildrlnkelvhnvalrveetedadafrvsgrgelhlsvlienmrregfelavsrpkvifreidgrkqepyenvtldveeqhqgsvmqalgerkgdlknmnpdgkgrvrldyvipsrgligfrsefmtmtsgtgllystfshyddvrpgevgqrqngvlisngqgkavafalfglqdrgklflghgaevyegqiigihsrsndltvncltgkkltnmrasgtdeavvlvppirmtleqalefidddelvevtptsirirkrhltendrrranrapkdd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=typA+AND+escherichia+coli Pubmed(typA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=typA Textpresso(typA)] | |||
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Revision as of 23:26, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
typA |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
protein possibly involved in LPS biosynthesis and host colonization[2][3] GTPase, regulatory, ribosome-associated; phosphorylated protein involved in global gene regulation; non-essential gene[4] |
| Product Synonyms(s) |
GTP-binding protein[1], B3871[2][1], YihK[2][1], BipA[2][1], TypA[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype |
failure to grow at low temperatures[5] |
| Regulation/Expression | |
| Regulation/Activity |
test2 |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Pfennig, PL & Flower, AM (2001) BipA is required for growth of Escherichia coi K12 at low temperature. Mol. Genet. Genomics 266 313-7 PubMed