rpsB:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''rpsB''  
''rpsB''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK0168, b0169, JW0164''<ref name='LIB:Riley_2006'/>
''ECK0168, b0169, JW0164''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
30S ribosomal subunit protein S2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
30S ribosomal subunit protein S2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
Line 43: Line 43:
30S ribosomal subunit protein S2; binds Zn(II)<ref name='LIB:EcoGene'/>
30S ribosomal subunit protein S2; binds Zn(II)<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
30S ribosomal subunit protein S2<ref name='LIB:Riley_2006'/>, B0169<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
30S ribosomal subunit protein S2<ref name='LIB:Riley_2006'/>, B0169<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0003735 structural constituent of ribosome ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008270 zinc ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006412 translation ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0022627 cytosolic small ribosomal subunit ([http://www.geneontology.org/GO.evidence.shtml IDA])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:rpsB-tsf|rpsB-tsf]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rpsB-tsf|rpsB-tsf]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=rpsB&loc=MG1655:189874..190599,W3110:189874..190599,DH10B:163978..164703,REL606:192716..193441 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=192716&end=193441&gene=rpsB&aa=matvsmrdmlkagvhfghqtrywnpkmkpfifgarnkvhiinlektvpmfnealaelnkiasrkgkilfvgtkraaseavkdaalscdqffvnhrwlggmltnwktvrqsikrlkdletqsqdgtfdkltkkealmrtreleklenslggikdmgglpdalfvidadhehiaikeannlgipvfaivdtnsdpdgvdfvipgnddairavtlylgavaatvregrsqdlasqaeesfveae Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsB+AND+escherichia+coli Pubmed(rpsB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rpsB Textpresso(rpsB)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 00:27, 22 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rpsB

Gene Synonym(s)

ECK0168, b0169, JW0164[1]

Product Desc.

30S ribosomal subunit protein S2[2][3];

Component of 30S ribosomal subunit[2][3]; ribosome[2][3]

30S ribosomal subunit protein S2; binds Zn(II)[4]

Product Synonyms(s)

30S ribosomal subunit protein S2[1], B0169[2][1], RpsB[2][1]

Function from GO

Molecular Function

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rpsB-tsf[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rpsB)    Textpresso(rpsB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


rpsB is required for growth below 8C, which is enabled by transgenic Oleispira antarctica Cpn10/60. Lon substrate.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=rpsB:Quickview&oldid=1033234"