rplY:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rplY'' | ''rplY'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2179, b2185, JW2173''<ref name='LIB:Riley_2006'/> | ''ECK2179, b2185, JW2173''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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50S ribosomal subunit protein L25<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | 50S ribosomal subunit protein L25<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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50S ribosomal subunit protein L25; 5S rRNA-binding <ref name='LIB:EcoGene'/> | 50S ribosomal subunit protein L25; 5S rRNA-binding <ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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50S ribosomal subunit protein L25<ref name='LIB:Riley_2006'/>, B2185<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RplY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 50S ribosomal subunit protein L25<ref name='LIB:Riley_2006'/>, B2185<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RplY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rplY|rplY]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rplY|rplY]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rplY&loc=MG1655:2280539..2280823,W3110:2285851..2286135,DH10B:2371527..2371811,REL606:2233705..2233989 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2233705&end=2233989&gene=rplY&aa=mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysevltivvdgkeikvkaqdvqrhpykpklqhidfvra Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rplY+AND+escherichia+coli Pubmed(rplY)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rplY Textpresso(rplY)] | |||
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Revision as of 23:35, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rplY |
|---|---|
| Gene Synonym(s) |
ECK2179, b2185, JW2173[1] |
| Product Desc. |
50S ribosomal subunit protein L25[2][3]; Component of 50S ribosomal subunit[3]; ribosome[2][3] 50S ribosomal subunit protein L25; 5S rRNA-binding [4] |
| Product Synonyms(s) |
50S ribosomal subunit protein L25[1], B2185[2][1], RplY[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
rplY is a non-essential gene as judged by the ability to recombineer haploid deletions (Baba, 2006; Korepanov, 2006). Mutants lacking RplY grow slowly and have reduced protein synthesis, possibly due to a problem with ribosome recycling (Korepanov, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.