recJ:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''recJ'' | ''recJ'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2887, b2892, JW2860''<ref name='LIB:Riley_2006'/> | ''ECK2887, b2892, JW2860''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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ssDNA 5'-3' exonuclease involved in recombination<ref name='LIB:EcoGene'/> | ssDNA 5'-3' exonuclease involved in recombination<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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ssDNA exonuclease, 5' --> 3'-specific<ref name='LIB:Riley_2006'/>, B2892<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ssDNA exonuclease, 5' --> 3'-specific<ref name='LIB:Riley_2006'/>, B2892<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:dsbC-recJ-prfB|dsbC-recJ-prfB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:dsbC-recJ-prfB|dsbC-recJ-prfB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=recJ&loc=MG1655:3036128..3034395,W3110:3036762..3035029,REL606:2923859..2922126,DH10B:3129998..3128265 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3129998&end=3128265&gene=recJ&aa=mkqqiqlrrrevdetadlpaelppllrrlyasrgvrsaqelersvkgmlpwqqlsgvekaveilynafregtriivvgdfdadgatstalsvlamrslgcsnidylvpnrfedgyglspevvdqahargaqlivtvdngisshagveharslgipvivtdhhlpgdtlpaaeaiinpnlrdcnfpskslagvgvafylmlalrtflrdqgwfderniaipnlaelldlvalgtvadvvpldannriltwqgmsriragkcrpgikallevanrdaqklaasdlgfalgprlnaagrlddmsvgvalllcdnigearvlaneldalnqtrkeieqgmqiealtlceklersrdtlpgglamyhpewhqgvvgilasrikerfhrpviafapagdgtlkgsgrsiqglhmrdalerldtlypgmmlkfgghamaaglsleedkfklfqqrfgelvtewldpsllqgevvsdgplspaemtmevaqllrdagpwgqmfpeplfdghfrllqqrlvgerhlkvmvepvgggplldgiafnvdtalwpdngvrevqlaykldinefrgnrslqiiidniwpi Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recJ+AND+escherichia+coli Pubmed(recJ)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=recJ Textpresso(recJ)] | |||
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Revision as of 23:13, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
recJ |
|---|---|
| Gene Synonym(s) |
ECK2887, b2892, JW2860[1] |
| Product Desc. |
ssDNA 5'-3' exonuclease involved in recombination[4] |
| Product Synonyms(s) |
ssDNA exonuclease, 5' --> 3'-specific[1], B2892[2][1], RecJ[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): dsbC-recJ-prfB[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Lovett and Kolodner (1989) N-terminally sequenced RecJ, but the native RBS was not used to direct translation, so it has been removed from the Verified Set. theless, the GTG start codon has been confirmed by mutational analysis in Haggerty and Lovett (1997).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.