hisF:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''hisF''  
''hisF''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2020, b2025, JW2007''<ref name='LIB:Riley_2006'/>
''ECK2020, b2025, JW2007''<ref name='LIB:Riley_2006'/>, JW2007''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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imidazole glycerol phosphate synthase, HisF subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
imidazole glycerol phosphate synthase, HisF subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Cyclase component of imidazole glycerol phosphate (IGP) synthase<ref name='LIB:EcoGene'/>
Cyclase component of imidazole glycerol phosphate (IGP) synthase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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imidazole glycerol phosphate synthase, catalytic subunit with HisH<ref name='LIB:Riley_2006'/>, B2025<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HisF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, hisF enzyme<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''imidazole glycerol phosphate synthase, catalytic subunit with HisH<ref name='LIB:Riley_2006'/>, B2025<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HisF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, hisF enzyme<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2020, JW2007, b2025''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hisBHAFI|hisBHAFI]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hisLGDCBHAFI|hisLGDCBHAFI]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hisBHAFI|hisBHAFI]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hisLGDCBHAFI|hisLGDCBHAFI]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hisF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10448]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000441&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hisF&loc=MG1655%3A2093868..2094644,W3110%3A2097981..2098757,REL606%3A2025846..2026622,DH10B%3A2184876..2185652,BW2952%3A1986351..1987127]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1986351&end=1987127&gene=hisF&aa=mlakriipcldvrdgqvvkgvqfrnheiigdivplakryaeegadelvfyditassdgrvvdkswvsrvaevidipfcvaggiksledaakilsfgadkisinspaladptlitrladrfgvqcivvgidtwydaetgkyhvnqytgdesrtrvtqwetldwvqevqkrgageivlnmmnqdgvrngydleqlkkvrevchvpliasggagtmehfleafrdadvdgalaasvfhkqiinigelkaylatqgveiric]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hisF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hisF]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hisF

Gene Synonym(s)

ECK2020, b2025, JW2007[1], JW2007

Product Desc.

imidazole glycerol phosphate synthase, HisF subunit[2][3];

Component of imidazole glycerol phosphate synthase[2][3]

Cyclase component of imidazole glycerol phosphate (IGP) synthase[4]

Product Synonyms(s)

imidazole glycerol phosphate synthase, catalytic subunit with HisH[1], B2025[2][1], HisF[2][1], hisF enzyme[2][1] , ECK2020, JW2007, b2025

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hisBHAFI[2], hisLGDCBHAFI[2]

Regulation/Activity
Quick Links



        

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Notes

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N-terminus of purified HisF was sequenced by Klem and Davisson (1993), and the fMet is not clipped. Omitted from Verified set because natural RBS was not used. Natural RBS is very good and this is almost certainly the in vivo start.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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