tonB:Quickview: Difference between revisions
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{{Tab On|Quickview|tonB}}{{Tab|Gene|tonB}}{{Tab|Gene Product(s)|tonB}}{{Tab|Expression|tonB}}{{Tab|Evolution|tonB}}{{Tab|On One Page|tonB}}{{TabsBottom}} | {{Tab On|Quickview|tonB}}{{Tab|Gene|tonB}}{{Tab|Gene Product(s)|tonB}}{{Tab|Expression|tonB}}{{Tab|Evolution|tonB}}{{Tab|On One Page|tonB}}{{TabsBottom}} | ||
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!{{table_heading_style}} | | !align=left {{table_heading_style}} |Standard Name | ||
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''tonB'' | |||
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!{{table_heading_style}} | | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1246, b1252, JW5195, T1rec, exbA''<ref name='LIB:Riley_2006'/>, exbA'' | |||
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!{{table_heading_style}} | | !align=left {{table_heading_style}} |Product Desc. | ||
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TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
Component of [[:Category:Complex:TonB energy transducing system|TonB energy transducing system]]<ref name='LIB:EcoCyc11.1'/> | Component of [[:Category:Complex:TonB energy transducing system|TonB energy transducing system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Outer Membrane Ferric Citrate Transport System|Outer Membrane Ferric Citrate Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Outer Membrane Ferrichrome Transport System|Outer Membrane Ferrichrome Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Outer Membrane Ferric Enterobactin Transport System|Outer Membrane Ferric Enterobactin Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:vitamin B12 outer membrane transport complex|vitamin B12 outer membrane transport complex]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:ferric dicitrate uptake system|ferric dicitrate uptake system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:ferrichrome uptake system|ferrichrome uptake system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Ferric Enterobactin Transport System|Ferric Enterobactin Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:vitamin B12 transport system|vitamin B12 transport system]]<ref name='LIB:EcoCyc11.1'/> | ||
Uptake of chelated Fe(2+) and cyanocobalamin; works in conjunction with OM receptors; energy transducer; sensitivity to T1, phi80, and colicins; forms a complex with ExbB and ExbD<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Product Synonyms(s) | |||
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''membrane spanning protein in TonB-ExbB-ExbD complex<ref name='LIB:Riley_2006'/>, B1252<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TonB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1246, exbA, JW5195, T1rec, b1252'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!{{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!{{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:tonB|tonB]]<ref name='LIB:EcoCyc10.6'/>, OP00228 | transcription unit(s): [[:Category:Txn_unit:tonB|tonB]]<ref name='LIB:EcoCyc10.6'/>, OP00228 | ||
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!{{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tonB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11012]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001001&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tonB&loc=MG1655%3A1309113..1309832,W3110%3A1312803..1313522,DH10B%3A1398509..1399228,REL606%3A1308683..1309402,BW2952%3A1199962..1200681]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1199962&end=1200681&gene=tonB&aa=mtldlprrfpwptllsvcihgavvagllytsvhqvielpapaqpisvtmvtpadleppqavqpppepvvepepepepipeppkeapvviekpkpkpkpkpkpvkkvqeqpkrdvkpvesrpaspfentaparltsstataatskpvtsvasgpralsrnqpqyparaqalriegqvkvkfdvtpdgrvdnvqilsakpanmferevknamrrwryepgkpgsgivvnilfkingtteiq]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tonB+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tonB]] | |||
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==Notes== | ===Notes=== | ||
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Periplasmic TonB is anchored to the cytoplasmic membrane by a signal anchor and interacts with outer membrane proteins, thus TonB spans the periplasmic space. TonB contains 40 proline residues (17%).<ref name='LIB:EcoGene'/> | |||
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==References== | ==References== | ||
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Latest revision as of 21:45, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
tonB |
|---|---|
| Gene Synonym(s) |
ECK1246, b1252, JW5195, T1rec, exbA[1], exbA |
| Product Desc. |
TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins[2][3]; Component of TonB energy transducing system[3]; Outer Membrane Ferric Citrate Transport System[3]; Outer Membrane Ferrichrome Transport System[3]; Outer Membrane Ferric Enterobactin Transport System[3]; vitamin B12 outer membrane transport complex[3]; ferric dicitrate uptake system[3]; ferrichrome uptake system[3]; Ferric Enterobactin Transport System[3]; vitamin B12 transport system[3] Uptake of chelated Fe(2+) and cyanocobalamin; works in conjunction with OM receptors; energy transducer; sensitivity to T1, phi80, and colicins; forms a complex with ExbB and ExbD[4] |
| Product Synonyms(s) |
membrane spanning protein in TonB-ExbB-ExbD complex[1], B1252[2][1], ExbA[2][1], TonB[2][1] , ECK1246, exbA, JW5195, T1rec, b1252 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Periplasmic TonB is anchored to the cytoplasmic membrane by a signal anchor and interacts with outer membrane proteins, thus TonB spans the periplasmic space. TonB contains 40 proline residues (17%).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.


