sstT:Gene Product(s): Difference between revisions

Standard name	SstT
Synonyms	sodium:serine/threonine symporter^[1], B3089^[2]^[1], YgjU^[2]^[1], SstT^[2]^[1] , ECK3080, JW3060, ygjU, b3089
Product description	SstT transporter^[2]^[3] Na+/serine (threonine) symporter^[4]
EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
	GO:0005886	plasma membrane	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01582	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005886	plasma membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0997	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005886	plasma membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-1003	C	Seeded from EcoCyc (v14.0)	complete
	GO:0006810	transport	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0813	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006835	dicarboxylic acid transport	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR001991	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006865	amino acid transport	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01582	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006865	amino acid transport	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0029	P	Seeded from EcoCyc (v14.0)	complete
	GO:0015171	amino acid transmembrane transporter activity	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01582	F	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	PMID:12097162^[5]	IDA: Inferred from Direct Assay		C		complete
	GO:0015293	symporter activity	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_01582	F	Seeded from EcoCyc (v14.0)	complete
	GO:0006865	amino acid transport	PMID:12097162^[5]	IDA: Inferred from Direct Assay		P		complete
	GO:0005295	neutral amino acid:sodium symporter activity	PMID:12097162^[5]	IDA: Inferred from Direct Assay		F		complete
	GO:0015293	symporter activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0769	F	Seeded from EcoCyc (v14.0)	complete
	GO:0015175	neutral amino acid transmembrane transporter activity	PMID:12097162^[5]	IDA: Inferred from Direct Assay		F		complete
	GO:0016020	membrane	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR001991	C	Seeded from EcoCyc (v14.0)	complete
	GO:0032329	serine transport	PMID:12097162^[5]	IDA: Inferred from Direct Assay		P		complete
	GO:0016020	membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0472	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0812	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-9909	C	Seeded from EcoCyc (v14.0)	complete
	GO:0017153	sodium:dicarboxylate symporter activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR001991	F	Seeded from EcoCyc (v14.0)	complete
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source
plasma membrane	C-terminus localized in the cytoplasm with 8 predicted transmembrane domains	Daley et al. (2005) ^[6]
plasma membrane			From EcoCyc^[3]
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	at EcoCyc MTTQRSPGLF RRLAHGSLVK QILVGLVLGI LLAWISKPAA EAVGLLGTLF VGALKAVAPI LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAGDIS PPSGIVEVMR GLVMSMVSNP IDALLKGNYI GILVWAIGLG FALRHGNETT KNLVNDMSNA VTFMVKLVIR FAPIGIFGLV SSTLATTGFS TLWGYAQLLV VLVGCMLLVA LVVNPLLVWW KIRRNPFPLV LLCLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM AGAAITITVL TLAAVNTLGI PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG ISNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDDRLANS ALRN
Length	414
Mol. Wt	43.478 kDa
pI	8.6 (calculated)
Extinction coefficient	34,950 - 35,950 (calc based on 5 Y, 5 W, and 8 C residues)
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes	References
Initiator Methionine	1	Removed	UniProt:P0AGE4
Domain	18..401	PF00375 Sodium:dicarboxylate symporter family		PMID:19920124^[7]
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<motif_map/>

Click the image to view raw output from TMHMM.

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=sstT taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
NCBI (Protein) (EcoliWiki Page)	GI:16130984	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:947605	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0010159	Escherichia coli str. K-12 substr. MG1655
UniProt (EcoliWiki Page)	UniProtKB/Swiss-Prot:P0AGE4	Escherichia coli str. K-12 substr. MG1655
EcoCyc	EcoCyc:EG12732	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:EG12732	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:947605	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120002374	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB2590	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ ^5.0 ^5.1 ^5.2 ^5.3 ^5.4 Kim, YM et al. (2002) Purification, reconstitution, and characterization of Na(+)/serine symporter, SstT, of Escherichia coli. J. Biochem. 132 71-6 PubMed
↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

sstT:Gene Product(s): Difference between revisions

Latest revision as of 20:59, 17 February 2015

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

@@ Line 35: / Line 35: @@
 *
 ****************************************************************************************** -->{{Product_nomenclature_help}}
-{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{|   id="F46aad10c15c11"  class=" tableEdit Product_nomenclature_table"
 |-
@@ Line 44: / Line 44: @@
 !align=left {{table heading style}} |Synonyms
 ||
-sodium:serine/threonine symporter<ref name='LIB:Riley_2006'/>, B3089<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SstT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+''sodium:serine/threonine symporter<ref name='LIB:Riley_2006'/>, B3089<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SstT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3080, JW3060, ygjU, b3089''
 |-
 !align=left {{table heading style}} |Product description
@@ Line 56: / Line 56: @@
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 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.F46aad10c15c11-->
@@ Line 75: / Line 75: @@
 *
 ****************************************************************************************** -->{{Product_GO_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="R46aad10d28c0e"  class=" tableEdit GO_table_product dataTable"
 |- {{table_heading_style}}
-!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
 |-
 |
 |
-GO:0017153
+GO:0005886
 |
-sodium:dicarboxylate symporter activity
+plasma membrane
 |
-GO_REF:0000002
+GOA:hamap<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001991
+HAMAP:MF_01582
 |
-F
+C
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 101: / Line 101: @@
 |
-GO:0016021
+GO:0005886
 |
-integral to membrane
+plasma membrane
 |
-GO_REF:0000004
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0812
+SP_KW:KW-0997
 |
 C
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 120: / Line 120: @@
 |
-GO:0016020
+GO:0005886
 |
-membrane
+plasma membrane
 |
-GO_REF:0000002<br />GO_REF:0000004<br />GO_REF:0000004
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001991<br />SP_KW:KW-0397<br />SP_KW:KW-0472
+SP_KW:KW-1003
 |
 C
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 139: / Line 139: @@
 |
-GO:0015293
+GO:0006810
 |
-symporter activity
+transport
 |
-GO_REF:0000004
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0769
+SP_KW:KW-0813
 |
-F
+P
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 158: / Line 158: @@
 |
-GO:0006865
+GO:0006835
 |
-amino acid transport
+dicarboxylic acid transport
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0029
+InterPro:IPR001991
 |
 P
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 177: / Line 177: @@
 |
-GO:0006835
+GO:0006865
 |
-dicarboxylic acid transport
+amino acid transport
 |
-GO_REF:0000002
+GOA:hamap<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001991
+HAMAP:MF_01582
 |
 P
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 196: / Line 196: @@
 |
-GO:0006810
+GO:0006865
 |
-transport
+amino acid transport
 |
-GO_REF:0000004
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0813
+SP_KW:KW-0029
 |
 P
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
 |-
 |
 |
-GO:0015292
+GO:0015171
 |
-uniporter activity
+amino acid transmembrane transporter activity
 |
+GOA:hamap<br />GO_REF:0000020
 |
+IEA: Inferred from Electronic Annotation
 |
+HAMAP:MF_01582
 |
 F
 |
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
+Seeded from [[EcoCyc]] (v14.0)
 |
-required fields missing
+complete
 |-
 |
 |
-GO:0005886
+GO:0016021
 |
-plasma membrane
+integral to membrane
 |
-GO_REF:0000020<br />GO_REF:0000004<br />GO_REF:0000004<br />GO_REF:0000023
+PMID:12097162
 |
-IEA: Inferred from Electronic Annotation
+IDA: Inferred from Direct Assay
 |
-HAMAP:MF_01582<br />SP_KW:KW-0997<br />SP_KW:KW-1003<br />SP_SL:SL-0037
 |
 C
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
 |
 complete
@@ Line 253: / Line 253: @@
 |
-GO:0015171
+GO:0015293
 |
-amino acid transmembrane transporter activity
+symporter activity
 |
-GO_REF:0000020
+GOA:hamap<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
@@ Line 265: / Line 265: @@
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 272: / Line 272: @@
 |
-GO:0005886
+GO:0006865
 |
-plasma membrane
+amino acid transport
 |
-GO_REF:0000020<br />GO_REF:0000004<br />GO_REF:0000004<br />GO_REF:0000023
+PMID:12097162
 |
-IEA: Inferred from Electronic Annotation
+IDA: Inferred from Direct Assay
 |
-HAMAP:MF_01582<br />SP_KW:KW-0997<br />SP_KW:KW-1003<br />SP_SL:SL-0037
 |
-C
+P
 |
-Seeded from EcoCyc
 |
 complete
@@ Line 291: / Line 291: @@
 |
-GO:0006810
+GO:0005295
 |
-transport
+neutral amino acid:sodium symporter activity
 |
-GO_REF:0000004
+PMID:12097162
 |
-IEA: Inferred from Electronic Annotation
+IDA: Inferred from Direct Assay
 |
-SP_KW:KW-0813
 |
-P
+F
 |
-Seeded from EcoCyc
 |
 complete
@@ Line 310: / Line 310: @@
 |
-GO:0006835
+GO:0015293
 |
-dicarboxylic acid transport
+symporter activity
 |
-GO_REF:0000002
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001991
+SP_KW:KW-0769
 |
-P
+F
 |
-Seeded from EcoCyc
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 329: / Line 329: @@
 |
-GO:0006865
+GO:0015175
 |
-amino acid transport
+neutral amino acid transmembrane transporter activity
 |
-GO_REF:0000020<br />GO_REF:0000004
+PMID:12097162
 |
-IEA: Inferred from Electronic Annotation
+IDA: Inferred from Direct Assay
 |
-HAMAP:MF_01582<br />SP_KW:KW-0029
 |
-P
+F
 |
-Seeded from EcoCyc
 |
 complete
@@ Line 348: / Line 348: @@
 |
-GO:0015171
+GO:0016020
 |
-amino acid transmembrane transporter activity
+membrane
 |
-GO_REF:0000020
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-HAMAP:MF_01582
+InterPro:IPR001991
 |
-F
+C
 |
-Seeded from EcoCyc
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 367: / Line 367: @@
 |
-GO:0015293
+GO:0032329
 |
-symporter activity
+serine transport
 |
-GO_REF:0000020<br />GO_REF:0000004
+PMID:12097162
 |
-IEA: Inferred from Electronic Annotation
+IDA: Inferred from Direct Assay
 |
-HAMAP:MF_01582<br />SP_KW:KW-0769
 |
-F
+P
 |
-Seeded from EcoCyc
 |
 complete
@@ Line 390: / Line 390: @@
 membrane
 |
-GO_REF:0000002<br />GO_REF:0000004
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001991<br />SP_KW:KW-0472
+SP_KW:KW-0472
 |
 C
 |
-Seeded from EcoCyc
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 409: / Line 409: @@
 integral to membrane
 |
-GO_REF:0000004
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
@@ Line 417: / Line 417: @@
 C
 |
-Seeded from EcoCyc
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 424: / Line 424: @@
 |
-GO:0017153
+GO:0016021
 |
-sodium:dicarboxylate symporter activity
+integral to membrane
 |
-GO_REF:0000002
+GO_REF:0000023
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR001991
+SP_SL:SL-9909
 |
-F
+C
 |
-Seeded from EcoCyc
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
 |-
 |
 |
-GO:0006564
+GO:0017153
 |
-L-serine biosynthetic process
+sodium:dicarboxylate symporter activity
 |
+GOA:interpro<br />GO_REF:0000002
 |
+IEA: Inferred from Electronic Annotation
 |
+InterPro:IPR001991
 |
-P
+F
 |
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
+Seeded from [[EcoCyc]] (v14.0)
 |
-required fields missing
+complete
-|-
-|
-|
-GO:0009088
-|
-threonine biosynthetic process
-|
-|
-|
-|
-P
-|
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
-|
-required fields missing
-|-class='sortbottom'
+|- class="tableEdit_footer"
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@@ Line 512: / Line 493: @@
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 |-
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@@ Line 522: / Line 503: @@
 |
 Daley et al. (2005) <ref name=PMID:15919996/>
+|
 |
@@ Line 532: / Line 515: @@
 |
 From EcoCyc<ref name='LIB:EcoCyc11.1'/>
+|
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.R46aad118a9b45&page=26605&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table] || || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.R46aad118a9b45&page=26605&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table]</span> || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.R46aad118a9b45-->
@@ Line 555: / Line 540: @@
 *
 ****************************************************************************************** -->{{Product_physical_properties_help}}
-{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{|   id="P46aad11a4c933"  class=" tableEdit Product_phys_prop_table"
+|-
+!align=left {{table heading style}} |Name
+||
 |-
@@ Line 585: / Line 574: @@
 ,950 - 35,950 (calc based on 5 Y, 5 W, and 8 C residues)
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.P46aad11a4c933&page=26605&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table] ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.P46aad11a4c933&page=26605&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table]</span> ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.P46aad11a4c933-->
@@ Line 603: / Line 592: @@
 *
 ****************************************************************************************** -->{{Product_domains_motifs_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="T46aad11abdb8e"  class=" tableEdit Product_motif_table dataTable"
 |- {{table heading style}}
-!|Type!!Residues!!Description!!Notes
+!|Type!!Residues!!Description!!Notes!!References
 |-
 |
@@ Line 614: / Line 603: @@
 Removed
 |
 [http://www.uniprot.org/uniprot/P0AGE4#section_features UniProt:P0AGE4]
+|
+|-
+|
+Domain
+|
+..401
+|
+[http://pfam.janelia.org/family/PF00375 PF00375  Sodium:dicarboxylate symporter family]
+|
-|-class='sortbottom'
+|
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.T46aad11abdb8e&page=26605&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table] || || ||
+PMID:19920124
+|- class="tableEdit_footer"
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.T46aad11abdb8e&page=26605&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table]</span> || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.T46aad11abdb8e-->
@@ Line 640: / Line 642: @@
 *
 ****************************************************************************************** -->{{Product_structure_help}}
-{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{|   id="E46a8653d99eab"  class=" tableEdit Product_structure_table"
 |-
@@ Line 653: / Line 655: @@
 ||
 View models at:
-* [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=recA EcoliPredict]
+* [http://www.proteinmodelportal.org/query/uniprot/P0AGE4 Protein Model Portal]
-* [http://modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase]
+* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0AGE4 PSI-PRED (P0AGE4)]
-* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
+* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0AGE4 Genomes TO Protein (P0AGE4)] (GTOP)
-* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
-* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.E46a8653d99eab&page=26605&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table] ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.E46a8653d99eab&page=26605&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table]</span> ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.E46a8653d99eab-->
@@ Line 698: / Line 698: @@
 *
 ****************************************************************************************** -->{{Product_resources_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="H46aad11b90a06"  class=" tableEdit Product_resource_table"
 |- {{table_heading_style}}
 !|Resource type!!Source!!Notes/Reference
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.H46aad11b90a06&page=26605&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table] || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.H46aad11b90a06&page=26605&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table]</span> || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.H46aad11b90a06-->
@@ Line 720: / Line 720: @@
 *
 ****************************************************************************************** -->{{Gene_accessions_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="X46aad11bf0972"  class=" tableEdit Gene_accessions_table"
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |-
 |
-[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/16130984 GI:16130984]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/NP_417560.1 GeneID:947605]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[ASAP]]
+|
+ASAP:ABE-0010159
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
 |
-[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=YGJU-MONOMER EcoCyc:YGJU-MONOMER]
+[http://www.uniprot.org/uniprot/P0AGE4 UniProtKB/Swiss-Prot:P0AGE4]
 |
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[EcoCyc]]
+|
+EcoCyc:EG12732
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[[EcoGene]]
+|
+EcoGene:EG12732
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
 |
-[[uniprot:P0AGE4|UniProt:P0AGE4]]
+[http://www.ncbi.nlm.nih.gov/gene?term=947605 GeneID:947605]
 |
+Escherichia coli str. K-12 substr. MG1655
 |-
 |
-[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])
+[[RegulonDB]]
 |
-[http://pfam.sanger.ac.uk/family?acc=PF00375 PFAM:PF00375]
+RegulonDB:ECK120002374
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
+[[EchoBASE]]
 |
-[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_417560 RefSeq:NP_417560]
+EchoBASE:EB2590
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.X46aad11bf0972&page=26605&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.X46aad11bf0972&page=26605&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.X46aad11bf0972-->
@@ Line 770: / Line 805: @@
 *
 ****************************************************************************************** -->
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="U46a8654054d14"  class=" tableEdit Links_table"
 |- {{table_heading_style}}
 !|Name!!URL!!Comments
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.U46a8654054d14&page=26605&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.26605.U46a8654054d14&page=26605&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.26605.U46a8654054d14-->
@@ Line 791: / Line 826: @@
 {{BacktoTop}}
 [[Category:Proteins]]
-[[Category:GO:0015292_!_uniporter activity]][[Category:GO:0006564_!_L-serine biosynthetic process]][[Category:GO:0009088_!_threonine biosynthetic process]][[Category:Location:plasma membrane]]

sstT:Gene Product(s): Difference between revisions

Latest revision as of 20:59, 17 February 2015

Nomenclature

Notes

Function

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Notes

Gene Product Resources

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