Phage lambda FII:Gene: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
created page for a new gene.
 
touch
 
(19 intermediate revisions by 3 users not shown)
Line 1: Line 1:
__NOTOC__
<!--
<!--
***************************************************************************************************************************************************
***************************************************************************************************************************************************
Line 15: Line 14:
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
Line 25: Line 26:
==Nomenclature==
==Nomenclature==
{{BacktoTop}}
{{BacktoTop}}
{{{NOMENCLATURE_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.G4a2ff2cdedeae-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_nomenclature_help}}
{|  id="G4a2ff2cdedeae"  class=" tableEdit Gene_nomenclature_table" 
 
|-
!align=left {{table_heading_style}} |Standard name
||
Phage lambda <i>FII</i>
|-
!align=left {{table_heading_style}} |Mnemonic
||
 
|-
!align=left {{table_heading_style}} |Synonyms
||
<i>Fii</i>, lambdap10
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.G4a2ff2cdedeae&page=164747&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table]</span> ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.G4a2ff2cdedeae--></protect>
</protect>
</protect>
===Notes===
===Notes===
{{{NOMENCLATURE_NOTES}}}
 


==Location(s) and DNA Sequence==
==Location(s) and DNA Sequence==
{{BacktoTop}}
{{BacktoTop}}
<protect>
<protect>
{{{LOCATION_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.W4a2ff2cdf2881-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_location_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="W4a2ff2cdf2881"  class=" tableEdit Gene_location_table" 
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-
|
[[BW2952]]
|
 
|
NC_012759: 4161714..4162067<br /><gbrowseImage>
name=NC_012759:4161714..4162067
source=BW2952
preset=GeneLocation
</gbrowseImage>
 
|
{{GBrowseLink|BW2952|NC_012759|4161714|4162067|GBrowse (BW2952)}}
|
{{GBrowseFastaLink|BW2952|NC_012759|4161714|4162067|FASTA Dump}}
|-
|
NC_001416
|
 
|
NC_001416: 7612..7965<br /><gbrowseImage>
name=NC_001416:7612..7965
source=bacteriophage_lambda
preset=GeneLocation
</gbrowseImage>
 
|
{{GBrowseLink|bacteriophage_lambda|NC_001416|7612|7965|Gbrowse (Bacteriophage lambda)}}
|
{{GBrowseFastaLink|bacteriophage_lambda|NC_001416|7612|7965|FASTA Dump}}
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.W4a2ff2cdf2881&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.W4a2ff2cdf2881--></protect>
</protect>
</protect>
===Notes===
===Notes===
{{{LOCATION_NOTES}}}
 


==Sequence Features==
==Sequence Features==
{{BacktoTop}}
{{BacktoTop}}
{{{SEQUENCE_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.W4a2ff2cdf3854-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_sequence_features_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="W4a2ff2cdf3854"  class=" tableEdit Gene_sequence_features_table" 
|- {{table_heading_style}}
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.W4a2ff2cdf3854&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.W4a2ff2cdf3854--></protect>
<protect><!--Sequence_notes--></protect>
<protect><!--Sequence_notes--></protect>
====Notes====
====Notes====
{{{SEQUENCE_NOTES}}}
 


==Alleles and Phenotypes==
==Alleles and Phenotypes==
{{BacktoTop}}
{{BacktoTop}}
{{{ALLELES_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.A4a2ff2ce005c7-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_alleles_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A4a2ff2ce005c7"  class=" tableEdit Gene_allele_table dataTable" 
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.A4a2ff2ce005c7&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_allele_table edit table]</span> || || || || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.A4a2ff2ce005c7--></protect>
<protect><!--Alleles_notes--></protect>
<protect><!--Alleles_notes--></protect>
===Notes===
===Notes===
{{{ALLELES_NOTES}}}
 
 
 
==Genetic Interactions==
{{BacktoTop}}
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.164747.S4e04b5ed9d2d4-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Genetic_interaction_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="S4e04b5ed9d2d4"  class=" tableEdit Genetic_interaction_table dataTable" 
|- {{table_heading_style}}
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.164747.S4e04b5ed9d2d4&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table]</span> || || || || || ||
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.164747.S4e04b5ed9d2d4--></protect>
 
<!-- Genetic Interacdtions Notes -->
===Notes===


==Genetic Resources==
==Genetic Resources==
{{BacktoTop}}
{{BacktoTop}}
{{{GENE_RESOURCES_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.M4a2ff2ce015a0-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_resources_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M4a2ff2ce015a0"  class=" tableEdit Gene_resource_table" 
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.M4a2ff2ce015a0&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table]</span> || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.M4a2ff2ce015a0--></protect>
<protect><!--Gene_resources_notes--></protect>
<protect><!--Gene_resources_notes--></protect>
===Notes===
===Notes===
{{{GENE_RESOURCES_NOTES}}}
 


==Accessions in Other Databases==
==Accessions in Other Databases==
{{BacktoTop}}
{{BacktoTop}}
{{{GENE_ACCESSIONS_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.Y4a2ff2ce02a1a-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Gene_accessions_help}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Y4a2ff2ce02a1a"  class=" tableEdit Gene_accessions_table" 
|- {{table_heading_style}}
!|Database!!Accession!!Notes
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.Y4a2ff2ce02a1a&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.Y4a2ff2ce02a1a--></protect>
<protect><!--Gene_accessions_notes--></protect>
<protect><!--Gene_accessions_notes--></protect>
===Notes===
===Notes===
{{{GENE_ACCESSIONS_NOTES}}}
 


==Links==
==Links==
{{BacktoTop}}
{{BacktoTop}}
{{{LINKS}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164747.U4a2ff2ce03d72-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="U4a2ff2ce03d72"  class=" tableEdit Links_table" 
|- {{table_heading_style}}
!|Name!!URL!!Comments


|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164747.U4a2ff2ce03d72&page=164747&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164747.U4a2ff2ce03d72--></protect>
<noinclude><protect>
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
 
__NOTOC__
===Categories===
===Categories===
{{{CATEGORIES}}}
[[Category:Gene_List:Phage lambda]]
[[Category:Gene_List:BW2952]]

Latest revision as of 20:56, 19 September 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

[back to top]


<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

Phage lambda FII

Mnemonic
Synonyms

Fii, lambdap10

edit table

</protect>

Notes

Location(s) and DNA Sequence

[back to top]


<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

BW2952

NC_012759: 4161714..4162067
<gbrowseImage> name=NC_012759:4161714..4162067 source=BW2952 preset=GeneLocation </gbrowseImage>

NC_001416

NC_001416: 7612..7965
<gbrowseImage> name=NC_001416:7612..7965 source=bacteriophage_lambda preset=GeneLocation </gbrowseImage>

edit table

</protect>

Notes

Sequence Features

[back to top]


See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
edit table


Notes

Alleles and Phenotypes

[back to top]


See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Interactions

[back to top]



Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table


Notes

Accessions in Other Databases

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
edit table


Notes

Links

[back to top]


<protect>

References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Phage_lambda_FII:Gene&oldid=1481630"