Phage lambda Rz1:Gene: Difference between revisions

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|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
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==Nomenclature==
==Nomenclature==
{{BacktoTop}}
{{BacktoTop}}
{{{NOMENCLATURE_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164727.A4a2fd3be58372-->
<!--
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*
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{|  id="A4a2fd3be58372"  class=" tableEdit Gene_nomenclature_table" 
 
|-
!align=left {{table_heading_style}} |Standard name
||
''Lambda <i>Rz1</i>''
|-
!align=left {{table_heading_style}} |Mnemonic
||
 
|-
!align=left {{table_heading_style}} |Synonyms
||
<i>Rz1</i>, lambda gene 91
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164727.A4a2fd3be58372&page=164727&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table]</span> ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164727.A4a2fd3be58372--></protect>
</protect>
</protect>
===Notes===
===Notes===
{{{NOMENCLATURE_NOTES}}}
 


==Location(s) and DNA Sequence==
==Location(s) and DNA Sequence==
{{BacktoTop}}
{{BacktoTop}}
<protect>
<protect>
{{{LOCATION_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164727.T4a2fd3be597d1-->
<!--
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*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="T4a2fd3be597d1"  class=" tableEdit Gene_location_table" 
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-
|
Bacteriophage lambda
|
 
|
NC_001416: 45966..46427<br /><gbrowseImage>
name=NC_001416:45966..46427
source=bacteriophage_lambda
preset=GeneLocation
</gbrowseImage>
 
|
{{GBrowseLink|bacteriophage_lambda|NC_001416|45966|46427|Gbrowse (Bacteriophage lambda)}}
|
{{GBrowseFastaLink|bacteriophage_lambda|NC_001416|45966|46427|FASTA Dump}}
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164727.T4a2fd3be597d1&page=164727&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164727.T4a2fd3be597d1--></protect>
</protect>
</protect>
===Notes===
===Notes===
{{{LOCATION_NOTES}}}
 


==Sequence Features==
==Sequence Features==
{{BacktoTop}}
{{BacktoTop}}
{{{SEQUENCE_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164727.R4a2fd3be5a937-->
<!--
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*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
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{|  id="R4a2fd3be5a937"  class=" tableEdit Gene_sequence_features_table" 
|- {{table_heading_style}}
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164727.R4a2fd3be5a937&page=164727&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164727.R4a2fd3be5a937--></protect>
<protect><!--Sequence_notes--></protect>
<protect><!--Sequence_notes--></protect>
====Notes====
====Notes====
{{{SEQUENCE_NOTES}}}
 


==Alleles and Phenotypes==
==Alleles and Phenotypes==
{{BacktoTop}}
{{BacktoTop}}
{{{ALLELES_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164727.G4a2fd3be5b93b-->
<!--
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*
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{|  id="G4a2fd3be5b93b"  class=" tableEdit Gene_allele_table dataTable" 
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164727.G4a2fd3be5b93b&page=164727&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_allele_table edit table]</span> || || || || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.164727.G4a2fd3be5b93b--></protect>
<protect><!--Alleles_notes--></protect>
<protect><!--Alleles_notes--></protect>
===Notes===
===Notes===
{{{ALLELES_NOTES}}}
 
 
 
==Genetic Interactions==
{{BacktoTop}}
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.164727.P4e04b5fda5560-->
<!--
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*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="P4e04b5fda5560"  class=" tableEdit Genetic_interaction_table dataTable" 
|- {{table_heading_style}}
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.164727.P4e04b5fda5560&page=164727&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table]</span> || || || || || ||
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.164727.P4e04b5fda5560--></protect>
 
<!-- Genetic Interacdtions Notes -->
===Notes===


==Genetic Resources==
==Genetic Resources==
{{BacktoTop}}
{{BacktoTop}}
{{{GENE_RESOURCES_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164727.J4a2fd3be5c9c1-->
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{|  id="J4a2fd3be5c9c1"  class=" tableEdit Gene_resource_table" 
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164727.J4a2fd3be5c9c1&page=164727&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table]</span> || || ||
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<!--box uid=63ce1649aab8b3180235b0af7618f667.164727.J4a2fd3be5c9c1--></protect>
<protect><!--Gene_resources_notes--></protect>
<protect><!--Gene_resources_notes--></protect>
===Notes===
===Notes===
{{{GENE_RESOURCES_NOTES}}}
 


==Accessions in Other Databases==
==Accessions in Other Databases==
{{BacktoTop}}
{{BacktoTop}}
{{{GENE_ACCESSIONS_TABLE}}}
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164727.Q4a2fd3be5dbf9-->
<!--
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*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Q4a2fd3be5dbf9"  class=" tableEdit Gene_accessions_table" 
|- {{table_heading_style}}
!|Database!!Accession!!Notes
|-
|
[[EcoCyc]]
|
EcoCyc:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164727.Q4a2fd3be5dbf9&page=164727&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
|}
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<protect><!--Gene_accessions_notes--></protect>
<protect><!--Gene_accessions_notes--></protect>
===Notes===
===Notes===
{{{GENE_ACCESSIONS_NOTES}}}
 


==Links==
==Links==
{{BacktoTop}}
{{BacktoTop}}
{{{LINKS}}}
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!|Name!!URL!!Comments
 
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<noinclude><protect>
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
 
===Categories===
===Categories===
{{{CATEGORIES}}}
[[Category:Gene_List:Phage lambda]]
[[Category:Pha genes]]

Latest revision as of 20:56, 19 September 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

Lambda Rz1

Mnemonic
Synonyms

Rz1, lambda gene 91

edit table

</protect>

Notes

Location(s) and DNA Sequence

[back to top]


<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

Bacteriophage lambda

NC_001416: 45966..46427
<gbrowseImage> name=NC_001416:45966..46427 source=bacteriophage_lambda preset=GeneLocation </gbrowseImage>

edit table

</protect>

Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
edit table


Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table


Notes

Accessions in Other Databases

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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<protect>

References

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See Help:References for how to manage references in EcoliWiki.


Categories

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