Phage lambda Rz1:Expression: Difference between revisions
add pages for this gene |
Edited by EditTablesByTemplate.php maintenance script |
||
| (12 intermediate revisions by 2 users not shown) | |||
| Line 28: | Line 28: | ||
==Intracellular Levels== | ==Intracellular Levels== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.W4a2fd3c060157--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 35: | Line 35: | ||
* | * | ||
****************************************************************************************** -->{{Help Cellular levels}} | ****************************************************************************************** -->{{Help Cellular levels}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="W4a2fd3c060157" class=" tableEdit MoleculesPerCellTable" | ||
|- align='left' bgcolor='#CCCCFF' | |- align='left' bgcolor='#CCCCFF' | ||
!|Molecule!!Organism or Strain!! | !|Molecule!!Organism or Strain!!Value!!Units!!Experimental Conditions!!Assay used!!Notes!!Reference(s) | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.W4a2fd3c060157&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=MoleculesPerCellTable edit table]</span> || || || || || || || | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.W4a2fd3c060157--></protect> | ||
===Notes=== | ===Notes=== | ||
| Line 51: | Line 51: | ||
{|{{Prettytable}} | {|{{Prettytable}} | ||
|- | |- | ||
|<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | |<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.U4a2fd3c06147f--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 58: | Line 58: | ||
* | * | ||
****************************************************************************************** -->{{expression_transcription_help}} | ****************************************************************************************** -->{{expression_transcription_help}} | ||
{| | {| id="U4a2fd3c06147f" class=" tableEdit Expression_operons_table" | ||
|- {{table heading style}} | |- {{table heading style}} | ||
!|Transcription unit(s) | !|Transcription unit(s) | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.U4a2fd3c06147f&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=Expression_operons_table edit table]</span> | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.U4a2fd3c06147f--></protect>|| | ||
|} | |} | ||
<!--Transcription_notes--></protect> | <!--Transcription_notes--></protect> | ||
| Line 73: | Line 73: | ||
==Translation and Regulation of Translation== | ==Translation and Regulation of Translation== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
<protect> | <protect><gbrowseImage> | ||
name=NC_001416:46166..46206 | |||
source=bacteriophage_lambda | |||
type=Gene+DNA_+Protein | |||
preset=Nterminus | |||
</gbrowseImage> | |||
{{Nterm_closeup}} | |||
<!--Translation_notes--></protect> | <!--Translation_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
| Line 88: | Line 95: | ||
<protect> | <protect> | ||
<big>'''Mutations Affecting Expression'''</big> | <big>'''Mutations Affecting Expression'''</big> | ||
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.W4a2fd3c06245e--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 95: | Line 102: | ||
* | * | ||
****************************************************************************************** -->{{Expression_allele_table_help}} | ****************************************************************************************** -->{{Expression_allele_table_help}} | ||
{| | {| id="W4a2fd3c06245e" class=" tableEdit Expression_allele_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Allele Name!!Mutation!!Phenotype!!Reference | !|Allele Name!!Mutation!!Phenotype!!Reference | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.W4a2fd3c06245e&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=Expression_allele_table edit table]</span> || || || | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.W4a2fd3c06245e--></protect> | ||
<big>'''Expression Studies'''</big> | <big>'''Expression Studies'''</big> | ||
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.C4a2fd3c063455--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 112: | Line 119: | ||
* | * | ||
****************************************************************************************** -->{{Expression_studies_table_help}} | ****************************************************************************************** -->{{Expression_studies_table_help}} | ||
{| | {| id="C4a2fd3c063455" class=" tableEdit Expression_studies_table" | ||
|- {{table heading style}} | |- {{table heading style}} | ||
!|Type!!Reference!!Notes | !|Type!!Reference!!Notes | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.C4a2fd3c063455&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=Expression_studies_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.C4a2fd3c063455--></protect> | ||
<big>'''Expression Resources'''</big> | <big>'''Expression Resources'''</big> | ||
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.Y4a2fd3c0644e7--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 129: | Line 136: | ||
* | * | ||
****************************************************************************************** -->{{Expression_resource_table_help}} | ****************************************************************************************** -->{{Expression_resource_table_help}} | ||
{| | {| id="Y4a2fd3c0644e7" class=" tableEdit Expression_resource_table" | ||
|- {{table heading style}} | |- {{table heading style}} | ||
!|Resource Name!!Resource Type!!Description!!Source!!Notes | !|Resource Name!!Resource Type!!Description!!Source!!Notes | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.Y4a2fd3c0644e7&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=Expression_resource_table edit table]</span> || || || || | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.Y4a2fd3c0644e7--></protect> | ||
<protect><!--Expression_experimental_notes--></protect> | <protect><!--Expression_experimental_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
| Line 143: | Line 150: | ||
==Accessions Related to ''Rz1'' Expression== | ==Accessions Related to ''Rz1'' Expression== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.G4a2fd3c065747--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 150: | Line 157: | ||
* | * | ||
****************************************************************************************** -->{{Gene_accessions_help}} | ****************************************************************************************** -->{{Gene_accessions_help}} | ||
{| | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="G4a2fd3c065747" class=" tableEdit Gene_accessions_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Database!!Accession!!Notes | !|Database!!Accession!!Notes | ||
|- | |||
| | |||
[[EcoCyc]] | |||
| | |||
EcoCyc: | |||
| | |||
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
|- | |||
| | |||
[[EcoGene]] | |||
| | |||
EcoGene: | |||
| | |||
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
|- | |||
| | |||
[[RegulonDB]] | |||
| | |||
RegulonDB: | |||
| | |||
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
|- | |||
| | |||
[[EchoBASE]] | |||
| | |||
EchoBASE: | |||
| | |||
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
|- | |||
| | |||
[[ASAP]] | |||
| | |||
ASAP: | |||
| | |||
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]] | |||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.G4a2fd3c065747&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.G4a2fd3c065747--></protect> | ||
<protect><!--Accessions_notes--></protect> | <protect><!--Accessions_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
| Line 164: | Line 206: | ||
==Links== | ==Links== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
<protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.164700.A4a2fd3c066af4--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 171: | Line 213: | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| | {| id="A4a2fd3c066af4" class=" tableEdit Links_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Name!!URL!!Comments | !|Name!!URL!!Comments | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700. | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164700.A4a2fd3c066af4&page=164700&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=63ce1649aab8b3180235b0af7618f667.164700. | <!--box uid=63ce1649aab8b3180235b0af7618f667.164700.A4a2fd3c066af4--></protect> | ||
==References== | ==References== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{RefHelp}} | {{RefHelp}} | ||
<references/> | <references /> | ||
===Categories=== | ===Categories=== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
Latest revision as of 20:00, 21 July 2015
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Overview | Transcription | Translation | Turnover | Experimental | Links | References | Suggestions |
Overview
Intracellular Levels
| Molecule | Organism or Strain | Value | Units | Experimental Conditions | Assay used | Notes | Reference(s) |
|---|---|---|---|---|---|---|---|
| edit table |
Notes
Transcription and Transcriptional Regulation
| <protect>
See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.
|
||
|} </protect>
Notes
Translation and Regulation of Translation
<gbrowseImage> name=NC_001416:46166..46206 source=bacteriophage_lambda type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.
Notes
Turnover and Regulation of Turnover
</protect>
Notes
Experimental
Mutations Affecting Expression <protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.
| Allele Name | Mutation | Phenotype | Reference |
|---|---|---|---|
| edit table |
Expression Studies
See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.
| Type | Reference | Notes |
|---|---|---|
| edit table |
Expression Resources
See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.
| Resource Name | Resource Type | Description | Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Accessions Related to Rz1 Expression
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
EcoCyc: |
Escherichia coli str. K-12 substr. MG1655 | |
|
EcoGene: |
Escherichia coli str. K-12 substr. MG1655 | |
|
RegulonDB: |
Escherichia coli str. K-12 substr. MG1655 | |
|
EchoBASE: |
Escherichia coli str. K-12 substr. MG1655 | |
|
ASAP: |
Escherichia coli str. K-12 substr. MG1655 | |
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
Categories