Phage Mu orf2:Gene Product(s): Difference between revisions
Data loaded by TableEdit_Loader. |
imported>Wikientrybot Bulk deleting accessions. |
||
| (14 intermediate revisions by one other user not shown) | |||
| Line 11: | Line 11: | ||
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | -->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | ||
{{TabsTop}} | {{TabsTop}} | ||
{{Tab|Quickview| | {{Tab|Quickview|Phage_Mu_orf2}}{{Tab|Gene|Phage_Mu_orf2}}{{Tab On|Gene Product(s)|Phage_Mu_orf2}}{{Tab|Expression|Phage_Mu_orf2}}{{Tab|Evolution|Phage_Mu_orf2}}{{Tab|On One Page|Phage_Mu_orf2}}{{TabsBottom}} | ||
{| | {| | ||
|- | |- | ||
| Line 35: | Line 35: | ||
* | * | ||
****************************************************************************************** -->{{Product_nomenclature_help}} | ****************************************************************************************** -->{{Product_nomenclature_help}} | ||
{| | {| id="P49edfca56ab6b" class=" tableEdit Product_nomenclature_table" | ||
|- | |- | ||
| Line 54: | Line 54: | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.P49edfca56ab6b&page=162472&pagename={{FULLPAGENAMEE}}&type=1&template=Product_nomenclature_table edit table] || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.P49edfca56ab6b&page=162472&pagename={{FULLPAGENAMEE}}&type=1&template=Product_nomenclature_table edit table]</span> || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.P49edfca56ab6b--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.P49edfca56ab6b--></protect> | ||
| Line 73: | Line 73: | ||
* | * | ||
****************************************************************************************** -->{{Product_GO_help}} | ****************************************************************************************** -->{{Product_GO_help}} | ||
{| | {| id="P49edfca576448" class=" tableEdit GO_table_product dataTable" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Qualifier!!GO ID!!GO term name!!Reference | !|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.P49edfca576448&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_product edit table] || || || || || || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.P49edfca576448&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_product edit table]</span> || || || || || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.P49edfca576448--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.P49edfca576448--></protect> | ||
| Line 90: | Line 90: | ||
* | * | ||
****************************************************************************************** -->{{Product_interactions_help}} | ****************************************************************************************** -->{{Product_interactions_help}} | ||
{| | {| id="F49edfca57e65a" class=" tableEdit Product_interactions_table dataTable" | ||
|- {{table heading style}} | |- {{table heading style}} | ||
!|Partner Type!!Partner!!Notes!!References!!Evidence | !|Partner Type!!Partner!!Notes!!References!!Evidence | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.F49edfca57e65a&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_interactions_table edit table] || || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.F49edfca57e65a&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_interactions_table edit table]</span> || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.F49edfca57e65a--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.F49edfca57e65a--></protect> | ||
| Line 110: | Line 110: | ||
* | * | ||
****************************************************************************************** -->{{Product_localization_help}} | ****************************************************************************************** -->{{Product_localization_help}} | ||
{| | {| id="W49edfca5832b0" class=" tableEdit Product_localization_table" | ||
|- {{table heading style}} | |- {{table heading style}} | ||
!|Compartment!!Description!!Evidence!!Notes | !|Compartment!!Description!!Evidence!!Reference/Source!!Notes | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.W49edfca5832b0&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_localization_table edit table] || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.W49edfca5832b0&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_localization_table edit table]</span> || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.W49edfca5832b0--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.W49edfca5832b0--></protect> | ||
| Line 134: | Line 134: | ||
* | * | ||
****************************************************************************************** -->{{Product_physical_properties_help}} | ****************************************************************************************** -->{{Product_physical_properties_help}} | ||
{| | {| id="X49edfca58c934" class=" tableEdit Product_phys_prop_table" | ||
|- | |||
!align=left {{table heading style}} |Name | |||
|| | |||
|- | |- | ||
| Line 149: | Line 153: | ||
!align=left {{table heading style}} |Mol. Wt | !align=left {{table heading style}} |Mol. Wt | ||
|| | || | ||
14.28 kDa | |||
|- | |- | ||
!align=left {{table heading style}} |pI | !align=left {{table heading style}} |pI | ||
|| | || | ||
9. | 9.4 (calculated) | ||
|- | |- | ||
!align=left {{table heading style}} |Extinction coefficient | !align=left {{table heading style}} |Extinction coefficient | ||
|| | || | ||
11,000 - 11,125 (calc based on Y, 2 W, and 1 C residues) | |||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.X49edfca58c934&page=162472&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table] || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.X49edfca58c934&page=162472&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table]</span> || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.X49edfca58c934--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.X49edfca58c934--></protect> | ||
| Line 175: | Line 179: | ||
* | * | ||
****************************************************************************************** -->{{Product_domains_motifs_help}} | ****************************************************************************************** -->{{Product_domains_motifs_help}} | ||
{| | {| id="Q49edfca591008" class=" tableEdit Product_motif_table dataTable" | ||
|- {{table heading style}} | |- {{table heading style}} | ||
!|Type!!Residues!!Description!!Notes | !|Type!!Residues!!Description!!Notes!!References | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.Q49edfca591008&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_motif_table edit table] || || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.Q49edfca591008&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_motif_table edit table]</span> || || || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.Q49edfca591008--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.Q49edfca591008--></protect> | ||
| Line 191: | Line 195: | ||
</table> | </table> | ||
<span id= | <table><tr valign='top'><td> | ||
<span id='Structure'></span><big>'''Structure'''</big><br /> | |||
<protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162472.O49edfca595645--> | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162472.O49edfca595645--> | ||
<!-- | <!-- | ||
| Line 199: | Line 204: | ||
* | * | ||
****************************************************************************************** -->{{Product_structure_help}} | ****************************************************************************************** -->{{Product_structure_help}} | ||
{| | {| id="O49edfca595645" class=" tableEdit Product_structure_table" | ||
|- | |- | ||
!align=left {{table heading style}} |Structures | !align=left {{table heading style}} |Structures | ||
|| | |||
<beststructure> | |||
gene=Phage_Mu_23 | |||
taxon=10677 | |||
</beststructure> | |||
|- | |- | ||
!align=left {{table heading style}} |Models | !align=left {{table heading style}} |Models | ||
|| | |||
View models at: | |||
* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED] | |||
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP) | |||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.O49edfca595645&page=162472&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table] | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.O49edfca595645&page=162472&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table]</span> || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.O49edfca595645--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.O49edfca595645--></protect> | ||
<!--Structure_notes--></protect> | </td><td></protect> | ||
==== Structure figures ==== | |||
<protect><!-- ***** PLEASE DO NOT EDIT BELOW THIS LINE ***** --> | |||
</td><tr><table><!--Structure_notes--></protect> | |||
===Notes=== | ===Notes=== | ||
| Line 223: | Line 258: | ||
* | * | ||
****************************************************************************************** -->{{Product_resources_help}} | ****************************************************************************************** -->{{Product_resources_help}} | ||
{| | {| id="G49edfca599ded" class=" tableEdit Product_resource_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Resource type!!Source!!Notes/Reference | !|Resource type!!Source!!Notes/Reference | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.G49edfca599ded&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_resource_table edit table] || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.G49edfca599ded&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Product_resource_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.G49edfca599ded--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.G49edfca599ded--></protect> | ||
| Line 244: | Line 279: | ||
* | * | ||
****************************************************************************************** -->{{Gene_accessions_help}} | ****************************************************************************************** -->{{Gene_accessions_help}} | ||
{| | {| id="N49edfca59f806" class=" tableEdit Gene_accessions_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Database!!Accession!!Notes | !|Database!!Accession!!Notes | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.N49edfca59f806&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.N49edfca59f806&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.N49edfca59f806--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.N49edfca59f806--></protect> | ||
| Line 265: | Line 300: | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| | {| id="C49edfca5ab2ab" class=" tableEdit Links_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!|Name!!URL!!Comments | !|Name!!URL!!Comments | ||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.C49edfca5ab2ab&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || || | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162472.C49edfca5ab2ab&page=162472&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || || | ||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162472.C49edfca5ab2ab--></protect> | <!--box uid=421aa90e079fa326b6494f812ad13e79.162472.C49edfca5ab2ab--></protect> | ||
| Line 278: | Line 313: | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{RefHelp}} | {{RefHelp}} | ||
<references/> | <references /> | ||
===Categories=== | ===Categories=== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
Latest revision as of 18:52, 21 September 2011
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
hypothetical protein |
|---|---|
| Synonyms | |
| Product description |
gp23; |
| EC number (for enzymes) |
|
| edit table |
Notes
Function
Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| edit table |
Interactions
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
</protect>
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MTFASKSLLL AAVFTAVLSG GLWHRLDSTR HDNQTLRREL QTEQQARHTA EWLLHGQEQT MQVFSAIRAA NRAARLADET EHHDAKEKIT TAITGDNCST RPVPAVAADR LRELEKRTRA IGGDPARN |
| Length |
128 |
| Mol. Wt |
14.28 kDa |
| pI |
9.4 (calculated) |
| Extinction coefficient |
11,000 - 11,125 (calc based on Y, 2 W, and 1 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
|
Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
| </protect>
Structure figuresNotesGene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
NotesAccessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
NotesLinks
References
Categories
|