ydgH:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ydgH''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1599, b1604, JW1596''<ref name='LIB:Riley_2006'/>, JW1596''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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conserved hypothetical protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Predicted periplasmic protein, YhcN family, function unknown; contains 3 tandem YhcN domains<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted protein<ref name='LIB:Riley_2006'/>, B1604<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdgH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1599, JW1596, b1604''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ydgH|ydgH]]<ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||


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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydgH&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6860]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003449&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydgH&loc=MG1655%3A1676451..1677395,W3110%3A1680141..1681085,DH10B%3A1767412..1768356,REL606%3A1655622..1656566,BW2952%3A1568510..1569454]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1568510&end=1569454&gene=ydgH&aa=mklkntllasallsamafsvnaateltpeqaaavkpfdrvvvtgrfnaigeavkavsrradkegaasfyvvdtsdfgnsgnwrvvadlykadaekaeetsnrvingvvelpkdqavliepfdtvtvqgfyrsqpevndaitkaakakgaysfyivrqidanqggnqritafiykkdakkrivqspdvipadseagraalaaggeaakkveipgvattaspssevgrffetqsskggrytvtlpdgtkveelnkataammvpfdsikfsgnygnmtevsyqvakraakkgakyyhitrqwqergnnltvsadlyk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydgH+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydgH]]&nbsp;&nbsp;
 
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The first 22 aa are predicted to be a type I signal peptide.<ref name='LIB:EcoGene'/>
The first 22 aa are predicted to be a type I signal peptide.<ref name='LIB:EcoGene'/>
YdgH is a member of the [[YhcN_Family]] of paralogs.<ref name='PMID:9588799'/>






<noinclude>
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==References==
==References==
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{{BacktoTop}}

Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ydgH

Gene Synonym(s)

ECK1599, b1604, JW1596[1], JW1596

Product Desc.

conserved hypothetical protein[2][3]

Predicted periplasmic protein, YhcN family, function unknown; contains 3 tandem YhcN domains[4]

Product Synonyms(s)

predicted protein[1], B1604[2][1], YdgH[2][1] , ECK1599, JW1596, b1604

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydgH[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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The first 22 aa are predicted to be a type I signal peptide.[4]

YdgH is a member of the YhcN_Family of paralogs.[5]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Rudd, KE et al. (1998) Low molecular weight proteins: a challenge for post-genomic research. Electrophoresis 19 536-44 PubMed
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