rsgA:Quickview: Difference between revisions

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Quickview

Standard Name	rsgA
Gene Synonym(s)	ECK4157, b4161, JW4122, yjeQ^[1], engC, yjeQ
Product Desc.	ribosome small subunit-dependent GTPase A^[2]^[3] Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein^[4]
Product Synonyms(s)	ribosome small subunit-dependent GTPase A^[1], B4161^[2]^[1], YjeQ^[2]^[1], RsgA^[2]^[1] , ECK4157, engC, JW4122, yjeQ, b4161
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): rsgA^[2]
Regulation/Activity
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Notes

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rsgA(yjeQ) has been reported to be an essential gene, but deletion mutants have also been reported to grow slowly. RsgA:ribosomes is 1:200 in vivo. Guanine nucleotide-dependent 30S subunit binding greatly stimulates GTPase activity. OtherPDB (S.typhimurium):2RCN. RsgA may be involved in ribosome biogenesis.^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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@@ Line 23: / Line 23: @@
 *   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 *
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+****************************************************************************************** -->
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 !align=left {{table_heading_style}} |Standard Name
+||
+''rsgA''
 |-
 !align=left {{table_heading_style}} |Gene Synonym(s)
+||
+''ECK4157, b4161, JW4122, yjeQ''<ref name='LIB:Riley_2006'/>, engC, yjeQ''
 |-
 !align=left {{table_heading_style}} |Product Desc.
+||
+ribosome small subunit-dependent GTPase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein<ref name='LIB:EcoGene'/>
 |-
 !align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''ribosome small subunit-dependent GTPase A<ref name='LIB:Riley_2006'/>, B4161<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsgA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4157, engC, JW4122, yjeQ, b4161''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
 !align=left {{table_heading_style}} |Knock-Out Phenotype
+||
 |-
 !align=left {{table_heading_style}} |Regulation/Expression
+||
+transcription unit(s): [[:Category:Txn_unit:rsgA|rsgA]]<ref name='LIB:EcoCyc10.6'/>
 |-
 !align=left {{table_heading_style}} |Regulation/Activity
+||
+|-
+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rsgA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7841]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004337&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rsgA&loc=MG1655%3A4389532..4388480,W3110%3A4396189..4395137,DH10B%3A4489894..4488842,REL606%3A4368612..4369664,BW2952%3A4327215..4328267]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4327215&end=4328267&gene=rsgA&aa=mnanhqrrlktskekpdyddnlfgepdegivisrfgmhadvesadgdvhrcnirrtirslvtgdrvvwrpgkpaaegvnvkgiveavhertsvltrpdfydgvkpiaanidqivivsailpelslniidrylvacetlqiepiivlnkidllddegmafvneqmdiyrnigyrvlmvsshtqdglkpleealtgrisifagqsgvgkssllnallglqkeiltndisdnsglgqhtttaarlyhfphggdvidspgvrefglwhlepeqitqgfvefhdylglckyrdckhdtdpgcaireaveegkiaetrfenyhrilesmaqvktrknfsdtdd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsgA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rsgA]]&nbsp;&nbsp;
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rsgA:Quickview: Difference between revisions

Latest revision as of 21:46, 27 May 2013

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