xdhD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[xdhD:Gene|''xdhD]]'' (synonyms: ''ECK2877, b2881, JW2849, ygfN'')<ref name='LIB:Riley_2006'/>
''xdhD''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[xdhD:Gene_Product(s)|XdhD product]]<ref name='LIB:Riley_2006'/>: fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit product, Fe-S binding subunit product, B2881 product, YgfN product
''ECK2877, b2881, JW2849, ygfN''<ref name='LIB:Riley_2006'/>, ygfN''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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putative oxidoreductase; possible component of selenate reductase with possible role in purine salvage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
putative oxidoreductase; possible component of selenate reductase with possible role in purine salvage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:putative selenate reductase|putative selenate reductase]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:putative selenate reductase|putative selenate reductase]]<ref name='LIB:EcoCyc11.1'/>


Probable hypoxanthine dehydrogenase; mutation confers adenine sensitivity<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit<ref name='LIB:Riley_2006'/>, Fe-S binding subunit<ref name='LIB:Riley_2006'/>, B2881<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XdhD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2877, JW2849, ygfN, b2881''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ygfM|ygfM]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ygfM|ygfM]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=xdhD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7500]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004063&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=xdhD&loc=MG1655%3A3019338..3022208,W3110%3A3019972..3022842,REL606%3A2907070..2909940,DH10B%3A3113208..3116078,BW2952%3A2906486..2909356]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2906486&end=2909356&gene=xdhD&aa=miihftlngapqeltvnpgenvqkllfnmgmhsvrnsddgfgfagsdaiifngnivnaslliaaqlekadirtaeslgkwnelslvqqamvdvgvvqsgyndpaaaliitdlldriaaptreeiddalsglfsrdagwqqyyqvielavarknnpqatidiaptfrddlevigkhypktdaakmvqakpcyvedrvtadacvikmlrsphahalithldvskaealpgvvhvithlncpdiyytpggqsapepspldrrmfgkkmrhvgdrvaavvaeseeialealklidveyevlkpvmsideamaedapvvhdepvvyvagapdtleddnshaaqrgehmiinfpigsrprkniaasihghigdmdkgfadadviiertynstqaqqcptethicftrmdgdrlvihastqvpwhlrrqvarlvgmkqhkvhvikervgggfgskqdilleevcawatcvtgrpvlfrytreeefiantsrhvakvtvklgakkdgrltavkmdfrantgpygnhsltvpcngpalslplypcdnvdfqvttyysnicpngayqgygapkgnfaitmalaelaeqlqidqleiiernrvhegqelkilgaigegkaptsvpsaascaleeilrqgremiqwsspkpqngdwhigrgvaiimqksgipdidqancmiklesdgtfivhsggadigtgldtvvtklaaevlhcppqdvhvisgdtdhalfdkgayassgtcfsgnaarlaaenlrekilfhgaqmlgepvadvqlatpgvvrgkkgevsfgdiahkgetgtgfgslvgtgsyitpdfafpyganfaevavntrtgeirldkfyalldcgtpvnpelalgqiygatlraighsmseeiiydaeghpltrdlrsygapkigdiprdfravlvpsddkvgpfgaksiseigvngaapaiataihdacgiwlrewhftpekiltaleki]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xdhD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=xdhD]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

xdhD

Gene Synonym(s)

ECK2877, b2881, JW2849, ygfN[1], ygfN

Product Desc.

putative oxidoreductase; possible component of selenate reductase with possible role in purine salvage[2][3];

Component of putative selenate reductase[3]

Probable hypoxanthine dehydrogenase; mutation confers adenine sensitivity[4]

Product Synonyms(s)

fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit[1], Fe-S binding subunit[1], B2881[2][1], YgfN[2][1], XdhD[2][1] , ECK2877, JW2849, ygfN, b2881

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygfM[2]

Regulation/Activity
Quick Links



        

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Notes

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XdhD is a xanthine dehydrogenase homolog but probably has no xanthine dehydrogenase activity.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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