obgE:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[obgE:Gene|''obgE]]'' (synonyms: ''ECK3172, b3183, JW3150, cgtA, obg, yhbZ'')<ref name='LIB:Riley_2006'/>
''obgE''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[obgE:Gene_Product(s)|ObgE product]]<ref name='LIB:Riley_2006'/>: GTPase involved in cell partioning and DNA repair product, B3183 product, YhbZ product, CgtA product, Obg product
''ECK3172, b3183, JW3150, cgtA, obg, yhbZ''<ref name='LIB:Riley_2006'/>, yhbZ''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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GTPase involved in DNA replication and ribosome assembly<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
GTPase involved in DNA replication and ribosome assembly<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


DNA-binding GTPase involved in cell partioning and DNA repair; involved in ribosome assembly; GTP-bound form associates with 50S ribosomal subunits<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''GTPase involved in cell partioning and DNA repair<ref name='LIB:Riley_2006'/>, B3183<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CgtA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ObgE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Obg<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cgtA, ECK3172, JW3150, obg, yhbZ, b3183''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:obgE|obgE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:obgE|obgE]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=obgE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7656]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004206&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=obgE&loc=MG1655%3A3329776..3328604,W3110%3A3331609..3330437,DH10B%3A3427521..3426349,REL606%3A3265816..3266988,BW2952%3A3215752..3216924]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3215752&end=3216924&gene=obgE&aa=mkfvdeasilvvagdggngcvsfrrekyipkggpdggdggdggdvwmeadenlntlidyrfeksfraergqngasrdctgkrgkdvtikvpvgtrvidqgtgetmgdmtkhgqrllvakggwhglgntrfkssvnrtprqktngtpgdkrelllelmlladvgmlgmpnagkstfiravsaakpkvadypfttlvpslgvvrmdneksfvvadipgliegaaegaglgirflkhlercrvllhlididpidgtdpvenariiiselekysqdlatkprwlvfnkidlldkveaeekakaiaealgwedkyylisaasglgvkdlcwdvmtfiienpvvqaeeakqpekvefmwddyhrqqleeiaeeddedwdddwdeddeegvefiykr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=obgE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=obgE]]&nbsp;&nbsp;


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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

obgE

Gene Synonym(s)

ECK3172, b3183, JW3150, cgtA, obg, yhbZ[1], yhbZ

Product Desc.

GTPase involved in DNA replication and ribosome assembly[2][3]

DNA-binding GTPase involved in cell partioning and DNA repair; involved in ribosome assembly; GTP-bound form associates with 50S ribosomal subunits[4]

Product Synonyms(s)

GTPase involved in cell partioning and DNA repair[1], B3183[2][1], YhbZ[2][1], CgtA[2][1], ObgE[2][1], Obg[2][1] , cgtA, ECK3172, JW3150, obg, yhbZ, b3183

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): obgE[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


obgE mutants have lowered DnaA and elevated basal level ppGpp. obgE is required for phage lambda development. B. subtilis Obg binds ppGpp. Binds TrxA (Kumar, 2004).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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