yjcC:Quickview: Difference between revisions

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{|   id="P49b033473b4b7" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yjcC:Gene|''yjcC]]'' (synonyms: ''ECK4053, b4061, JW4022'')<ref name='LIB:Riley_2006'/>
''yjcC''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yjcC:Gene_Product(s)|YjcC product]]<ref name='LIB:Riley_2006'/>: predicted signal transduction protein (EAL domain containing protein) product, B4061 product
''ECK4053, b4061, JW4022''<ref name='LIB:Riley_2006'/>, JW4022''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Putative cyclic-di-GMP phosphodiesterase, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted signal transduction protein (EAL domain containing protein)<ref name='LIB:Riley_2006'/>, B4061<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4053, JW4022, b4061''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yjcC|yjcC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yjcC|yjcC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yjcC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11938]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001866&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yjcC&loc=MG1655%3A4273494..4275080,W3110%3A4279061..4280647,BW2952%3A4212339..4213925]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4212339&end=4213925&gene=yjcC&aa=mshrarhqllalpgiiflvlfpiilslwiaflwaksevnnqlrtfaqlaldkselvirqadlvsdaaeryqgqvctpahqkrmlniirgylyineliyardnhflcssliapvngytiapadykrepnvsiyyyrdtpffsgykmtymqrgnyvavinplfwsevmsddptlqwgvydtvtktffslskeasaatfsplihlkdltvqrngylyatvystkrpiaaivatsyqrlithfynhlifalpagilgslvllllwlrirqnylspkrklqralekhqlclyyqpiidiktekcigaeallrwpgeqgqimnpaefiplaekegmieqitdyvidnvfrdlgdylathadryvsinlsasdfhtsrliarinqkteqyavrpqqikfevtehafldvdkmtpiilafrqagyevaiddfgigysnlhnlkslnvdilkidksfvetltthktshliaehiielahslglktiaegveteeqvnwlrkrgvrycqgwffakamppqvfmqwmeqlpareltrgq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjcC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yjcC]]&nbsp;&nbsp;


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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yjcC

Gene Synonym(s)

ECK4053, b4061, JW4022[1], JW4022

Product Desc.

conserved protein[2][3]

Putative cyclic-di-GMP phosphodiesterase, function unknown[4]

Product Synonyms(s)

predicted signal transduction protein (EAL domain containing protein)[1], B4061[2][1], YjcC[2][1] , ECK4053, JW4022, b4061

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yjcC[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YjcC has a C-terminal putative cyclic-di-GMP phosphodiesterase EAL domain. Structural Genomics target No. 80 (http://afmb.cnrs-mrs.fr/article171.html[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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