topA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[topA:Gene|''topA]]'' (synonyms: ''ECK1268, b1274, JW1266, supX, asuA?'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''topA''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[topA:Gene_Product(s)|TopA product]]<ref name='LIB:Riley_2006'/>: DNA topoisomerase I, omega subunit product, B1274 product, SupX product, Topo I product, DNA topoisomerase I (&omega; protein) product
''ECK1268, b1274, JW1266, supX, asuA?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, asuA?''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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DNA topoisomerase I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
DNA topoisomerase I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Topoisomerase I<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA topoisomerase I, omega subunit<ref name='LIB:Riley_2006'/>, B1274<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SupX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TopA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Topo I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DNA topoisomerase I (&omega; protein)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , asuA?, ECK1268, JW1266, supX, b1274''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:topA|topA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:topA|topA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=topA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11013]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001002&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=topA&loc=MG1655%3A1329072..1331669,W3110%3A1332762..1335359,DH10B%3A1418468..1421065,REL606%3A1329420..1332017,BW2952%3A1219921..1222518]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1219921&end=1222518&gene=topA&aa=mgkalvivespakaktinkylgsdyvvkssvghirdlptsgsaakksadststktakkpkkdergalvnrmgvdpwhnweahyevlpgkekvvselkqlaekadhiylatdldregeaiawhlreviggddarysrvvfneitknairqafnkpgelnidrvnaqqarrfmdrvvgymvspllwkkiarglsagrvqsvavrlvverereikafvpeefwevdastttpsgealalqvthqndkpfrpvnkeqtqaavsllekarysvleredkpttskpgapfitstlqqaastrlgfgvkktmmmaqrlyeagyitymrtdstnlsqdavnmvrgyisdnfgkkylpespnqyaskensqeaheairpsdvnvmaeslkdmeadaqklyqliwrqfvacqmtpakydsttltvgagdfrlkargrilrfdgwtkvmpalrkgdedrilpavnkgdaltlveltpaqhftkpparfseaslvkelekrgigrpstyasiistiqdrgyvrvenrrfyaekmgeivtdrleenfrelmnydftaqmensldqvanheaewkavldhffsdftqqldkaekdpeeggmrpnqmvltsidcptcgrkmgirtastgvflgcsgyalppkerckttinlvpenevlnvlegedaetnalrakrrcpkcgtamdsylidpkrklhvcgnnptcdgyeieegefrikgydgpivecekcgsemhlkmgrfgkymactneeckntrkilrngevappkedpvplpelpceksdayfvlrdgaagvflaantfpksretraplveelyrfrdrlpeklryladapqqdpegnktmvrfsrktkqqyvssekdgkatgwsafyvdgkwvegkk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=topA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=topA]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

topA

Gene Synonym(s)

ECK1268, b1274, JW1266, supX, asuA?[1][2], asuA?

Product Desc.

DNA topoisomerase I[2][3]

Topoisomerase I[4]

Product Synonyms(s)

DNA topoisomerase I, omega subunit[1], B1274[2][1], SupX[2][1], TopA[2][1], Topo I[2][1], DNA topoisomerase I (ω protein)[2][1] , asuA?, ECK1268, JW1266, supX, b1274

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): topA[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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