tap:Quickview: Difference between revisions

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{|   id="I49b0261f10171" class=" tableEdit New_Quickview_Table"


|-
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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[tap:Gene|''tap]]'' (synonyms: ''ECK1886, b1885, JW1874'')<ref name='LIB:Riley_2006'/>
''tap''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[tap:Gene_Product(s)|Tap product]]<ref name='LIB:Riley_2006'/>: methyl-accepting protein IV product, B1885 product
''ECK1886, b1885, JW1874''<ref name='LIB:Riley_2006'/>, JW1874''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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Tap<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Tap<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:MCP-IV|MCP-IV]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:MCP-IV|MCP-IV]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Dipeptide chemoreceptor, methyl-accepting; MCP IV; flagellar regulon<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''methyl-accepting protein IV<ref name='LIB:Riley_2006'/>, B1885<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tap<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1886, JW1874, b1885''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:tar-tap-cheRBYZ|tar-tap-cheRBYZ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:tar-tap-cheRBYZ|tar-tap-cheRBYZ]]<ref name='LIB:EcoCyc10.6'/>  
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|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tap&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10987]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000976&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tap&loc=MG1655%3A1969008..1967407,W3110%3A1972698..1971097,REL606%3A1949754..1948153,DH10B%3A2059579..2057978,BW2952%3A1859466..1861067]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1859466&end=1861067&gene=tap&aa=mfnriristtlflililcgilqigsngmsfwafrddlqrlnqveqsnqqraalaqtravmlqastalnkagtltalsypaddiktlmttarasltqsttlfksfmamtagnehvrglqketeksfarwhndlehqatwlesnqlsdfltapvqgsqnafdvnfeawqleinhvleaasaqsqrnyqisalvfismiivaaiyissalwwtrkmivqplaiigshfdsiaagnlarpiavygrneitaifaslktmqqalrgtvsdvrkgsqemhigiaeivagnndlssrteqqaaslaqtaasmeqltatvgqnadnarqaselaknaattaqaggvqvstmthtmqeiatssqkigdiisvidgiafqtnilalnaaveaarageqgrgfavvagevrnlasrsaqaakeikglieesvnrvqqgsklvnnaaatmidivssvtrvndimgeiasaseeqqrgieqvaqavsqmdqvtqqnaslveeaavateqlanqadhlssrvavftleehevarhesvqlqiapvvs]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tap+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tap]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tap

Gene Synonym(s)

ECK1886, b1885, JW1874[1], JW1874

Product Desc.

Tap[2][3];

Component of MCP-IV[2][3]

Dipeptide chemoreceptor, methyl-accepting; MCP IV; flagellar regulon[4]

Product Synonyms(s)

methyl-accepting protein IV[1], B1885[2][1], Tap[2][1] , ECK1886, JW1874, b1885

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tar-tap-cheRBYZ[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Tap sense dipeptides indirectly through the periplasmic dipeptide binding protein DppA. Tap is a low-abundance chemoreceptor, 5- 10-fold lower than Tar and Tsr. Tap can function as a cold receptor during thermotaxis. Tap senses low pH as a repellent.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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