rnhA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>Wikientrybot
Adding EcoGene Comments
touch
 
(11 intermediate revisions by 2 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.2191.Q46a99bc547bc8-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2191.L49b022f6792aa-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 24: Line 24:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="L49b022f6792aa" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
||
||
[[rnhA:Gene|''rnhA]]'' (synonyms: ''ECK0214, b0214, JW0204, cer, dasF, herA, rnh, sdrA, sin, G306'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''rnhA''
|-
|-
!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
[[rnhA:Gene_Product(s)|RnhA product]]<ref name='LIB:Riley_2006'/>: ribonuclease HI, degrades RNA of DNA-RNA hybrids product, B0214 product, Sin product, Cer product, Rnh product, SdrA product, HerA product, DasF product
''ECK0214, b0214, JW0204, cer, dasF, herA, rnh, sdrA, sin, G306''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
||
||
RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


RNase HI; participates in DNA replication<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''ribonuclease HI, degrades RNA of DNA-RNA hybrids<ref name='LIB:Riley_2006'/>, B0214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sin<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rnh<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SdrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HerA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DasF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RnhA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cer, dasF, ECK0214, herA, JW0204, rnh, sdrA, sin, b0214''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
||


|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:rnhA|rnhA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rnhA|rnhA]]<ref name='LIB:EcoCyc10.6'/>  
Line 51: Line 60:
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rnhA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10860]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000851&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rnhA&loc=MG1655%3A236002..235535,W3110%3A236002..235535,DH10B%3A210106..209639,REL606%3A238926..238459,BW2952%3A235534..236001]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=235534&end=236001&gene=rnhA&aa=mlkqveiftdgsclgnpgpggygailryrgrektfsagytrttnnrmelmaaivalealkehcevilstdsqyvrqgitqwihnwkkrgwktadkkpvknvdlwqrldaalgqhqikwewvkghaghpenercdelaraaamnptledtgyqvev]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rnhA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rnhA]]&nbsp;&nbsp;


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.2191.Q46a99bc547bc8&page=2191&pagename={{FULLPAGENAMEE}}&type=1&template=Quickview_table edit table] ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.2191.L49b022f6792aa&page=2191&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.2191.Q46a99bc547bc8-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2191.L49b022f6792aa--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>

Latest revision as of 21:42, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rnhA

Gene Synonym(s)

ECK0214, b0214, JW0204, cer, dasF, herA, rnh, sdrA, sin, G306[1][2]

Product Desc.

RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication[2][3]

RNase HI; participates in DNA replication[4]

Product Synonyms(s)

ribonuclease HI, degrades RNA of DNA-RNA hybrids[1], B0214[2][1], Sin[2][1], Cer[2][1], Rnh[2][1], SdrA[2][1], HerA[2][1], DasF[2][1], RnhA[2][1] , cer, dasF, ECK0214, herA, JW0204, rnh, sdrA, sin, b0214

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rnhA[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]





References

[back to top]


  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=rnhA:Quickview&oldid=1395016"