secA:Quickview: Difference between revisions

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{|   id="M49b024cdd664b" class=" tableEdit New_Quickview_Table"


|-
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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[secA:Gene|''secA]]'' (synonyms: ''ECK0099, b0098, JW0096, azi, pea, prlD'')<ref name='LIB:Riley_2006'/>
''secA''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[secA:Gene_Product(s)|SecA product]]<ref name='LIB:Riley_2006'/>: preprotein translocase subunit, ATPase product, B0098 product, Pea product, Azi product, PrlD product
''ECK0099, b0098, JW0096, azi, pea, prlD''<ref name='LIB:Riley_2006'/>, prlD''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:Sec Protein Secretion Complex|Sec Protein Secretion Complex]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:Sec Protein Secretion Complex|Sec Protein Secretion Complex]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Translocon ATPase; targets protein precursors to the SecYE core translocon for secretion; autogenous translational repressor; ATP-dependent helicase activity on secMA mRNA; homodimeric/monomeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''preprotein translocase subunit, ATPase<ref name='LIB:Riley_2006'/>, B0098<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Pea<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Azi<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrlD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , azi, ECK0099, JW0096, pea, prlD, b0098''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:secMA-mutT|secMA-mutT]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:secMA-mutT|secMA-mutT]]<ref name='LIB:EcoCyc10.6'/>  
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|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=secA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10936]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000925&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=secA&loc=MG1655%3A108279..110984,W3110%3A108279..110984,DH10B%3A82383..85088,REL606%3A111083..113788,BW2952%3A108278..110983]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=108278&end=110983&gene=secA&aa=mliklltkvfgsrndrtlrrmrkvvniinamepemeklsdeelkgktaefrarlekgevlenlipeafavvreaskrvfgmrhfdvqllggmvlnerciaemrtgegktltatlpaylnaltgkgvhvvtvndylaqrdaennrplfeflgltvginlpgmpapakreayaaditygtnneygfdylrdnmafspeervqrklhyalvdevdsilideartpliisgpaedssemykrvnkiiphlirqekedsetfqgeghfsvdeksrqvnlterglvlieellvkegimdegeslyspanimlmhhvtaalrahalftrdvdyivkdgeviivdehtgrtmqgrrwsdglhqaveakegvqiqnenqtlasitfqnyfrlyeklagmtgtadteafefssiykldtvvvptnrpmirkdlpdlvymteaekiqaiiedikertakgqpvlvgtisiekselvsneltkagikhnvlnakfhaneaaivaqagypaavtiatnmagrgtdivlggswqaevaalenptaeqiekikadwqvrhdavleagglhiigterhesrridnqlrgrsgrqgdagssrfylsmedalmrifasdrvsgmmrklgmkpgeaiehpwvtkaianaqrkvesrnfdirkqlleyddvandqrraiysqrnelldvsdvsetinsiredvfkatidayippqsleemwdipglqerlkndfdldlpiaewldkepelheetlrerilaqsievyqrkeevvgaemmrhfekgvmlqtldslwkehlaamdylrqgihlrgyaqkdpkqeykresfsmfaamleslkyevistlskvqvrmpeeveeleqqrrmeaerlaqmqqlshqdddsaaaaalaaqtgerkvgrndpcpcgsgkkykqchgrlq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=secA]]&nbsp;&nbsp;


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{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Helicase activity is dispensable for both functions. Oligomerization induced by signal peptides. secA is regulated by the secretion competence of the SecM signal peptide. HT_Cmplx33_Cyt: AcpP+PurB+SecA. HT_Cmplx48_Mem: SecA+YdgA+YjiY.<ref name='LIB:EcoGene'/>




Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

secA

Gene Synonym(s)

ECK0099, b0098, JW0096, azi, pea, prlD[1], prlD

Product Desc.

SecA[2][3];

Component of Sec Protein Secretion Complex[2][3]

Translocon ATPase; targets protein precursors to the SecYE core translocon for secretion; autogenous translational repressor; ATP-dependent helicase activity on secMA mRNA; homodimeric/monomeric[4]

Product Synonyms(s)

preprotein translocase subunit, ATPase[1], B0098[2][1], Pea[2][1], Azi[2][1], PrlD[2][1], SecA[2][1] , azi, ECK0099, JW0096, pea, prlD, b0098

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): secMA-mutT[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Helicase activity is dispensable for both functions. Oligomerization induced by signal peptides. secA is regulated by the secretion competence of the SecM signal peptide. HT_Cmplx33_Cyt: AcpP+PurB+SecA. HT_Cmplx48_Mem: SecA+YdgA+YjiY.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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