rpsC:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00417 PFAM:PF00417]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11760:SF10 PTHR11760:SF10]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54814 SUPERFAMILY:54814]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54821 SUPERFAMILY:54821]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00189 PF00189  Ribosomal protein S3, C-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00417 PF00417  Ribosomal protein S3, N-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07650 PF07650  KH domain]
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[[EcoCyc]]
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EcoCyc:EG10902
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10902
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000893
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0895
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010848
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
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===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020844 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000008052 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-8494 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1058 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027953 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000278572 (score: 1.000; bootstrap: 100%)
  • ENSP00000343587 (score: 0.577)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000011816 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008611 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1350917 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6ENS5 (score: 1.000; bootstrap: 99%)
  • P06586 (score: 1.000; bootstrap: 99%)
  • Q6L3G0 (score: 1.000; bootstrap: 99%)
  • Q6QY47 (score: 0.934)
  • Q6QXY4 (score: 0.934)
  • P12146 (score: 0.934)
  • Q6END5 (score: 0.934)
  • Q6Z510 (score: 0.930)
  • Q95H49 (score: 0.904)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023935 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000009988 (score: 0.949)
  • ENSRNOP00000038496 (score: 0.529)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNL178W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000162445 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00011422001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000021885 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPSC

From SHIGELLACYC

E. coli O157

RPSC

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR11760:SF10

Superfamily (EcoliWiki Page)

SUPERFAMILY:54814

Superfamily (EcoliWiki Page)

SUPERFAMILY:54821

Pfam (EcoliWiki Page)

PF00189 Ribosomal protein S3, C-terminal domain

Pfam (EcoliWiki Page)

PF00417 Ribosomal protein S3, N-terminal domain

Pfam (EcoliWiki Page)

PF07650 KH domain

EcoCyc

EcoCyc:EG10902

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10902

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000893

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0895

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010848

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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