Cis Element:attI: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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attI
<i>attI</i>
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!align=left {{table_heading_style}} |Synonyms
!align=left {{table_heading_style}} |Synonyms
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{{GBrowseFastaLink|ecoli|NC_000913|806551|806565|FASTA Dump}}  
{{GBrowseFastaLink|ecoli|NC_000913|806551|806565|FASTA Dump}}  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.shigen.nig.ac.jp/ecoli/pec/index.jsp PEC]
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[http://www.shigen.nig.ac.jp/ecoli/pec/linear.GenesDetailAction.do?orfId=155&featureType=5 attI]
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[[EcoCyc]]
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EcoCyc:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />


===Categories===
===Categories===
[[Category:Cis Element]]
[[Category:Cis Element|attI]]

Latest revision as of 07:17, 27 May 2013

Cis element summary table

Standard Name

attI

Synonyms
Function

Integration site for P4-like cryptic prophage

Location

17.3 minutes in MG1655, located just before attLambda (attLAM)

SO terms


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Notes

Location and Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

17.3 minutes

MG1655: ..806565
gbrowse_img.php?coord=806551..806565&genome=ecoli&name=MG1655&trackset=DNA_unlabeled&width=300&.png

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Notes

Interactions

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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Notes

Accessions

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PEC

attI

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

References

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See Help:References for how to manage references in EcoliWiki.


Categories

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