lpxL:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[lpxL:Gene|''lpxL]]'' (synonyms: ''ECK1039, b1054, JW1041, htrB, waaM'')<ref name='LIB:Riley_2006'/>
''lpxL''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[lpxL:Gene_Product(s)|LpxL product]]<ref name='LIB:Riley_2006'/>: lauryl-acyl carrier protein (ACP)-dependent acyltransferase product, B1054 product, WaaM product, HtrB product
''ECK1039, b1054, JW1041, htrB, waaM''<ref name='LIB:Riley_2006'/>, waaM''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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LAUROYLACYLTRAN-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Lipid A biosynthesis, KDO2-lipid IVA lauroyl-ACP acyltransferase; not under heat shock regulation; membrane protein affecting cell division, growth, and high-temperature survival<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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Does not affect growth at low temperatures but causes a loss of viability at high temperatures in rich media (see [[PMID:1358874]]<ref name=PMID:1358874/>)
''lauryl-acyl carrier protein (ACP)-dependent acyltransferase<ref name='LIB:Riley_2006'/>, B1054<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1039, htrB, JW1041, waaM, b1054''
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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Does not affect growth at low temperatures but causes a loss of viability at high temperatures in rich media (see PMID:1358874)
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lpxL|lpxL]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:lpxL|lpxL]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lpxL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10464]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000457&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lpxL&loc=MG1655%3A1115805..1114885,W3110%3A1118159..1117239,DH10B%3A1171250..1170330,BW2952%3A1018810..1019730]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1018810&end=1019730&gene=lpxL&aa=mtnlpkfstallhprywltwlgigvlwlvvqlpypviyrlgcglgklalrfmkrrakivhrnlelcfpemseqerrkmvvknfesvgmglmetgmawfwpdrriarwtevigmehirdvqaqkrgillvgihfltlelgarqfgmqepgigvyrpndnplidwlqtwgrlrsnksmldrkdlkgmikalkkgevvwyapdhdygprssvfvplfaveqaatttgtwmlarmsgaclvpfvprrkpdgkgyqlimlppecspplddaettaawmnkvvekcimmapeqymwlhrrfktrpegvpsry]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpxL+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lpxL]]&nbsp;&nbsp;


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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lpxL

Gene Synonym(s)

ECK1039, b1054, JW1041, htrB, waaM[1], waaM

Product Desc.

Lipid A biosynthesis, KDO2-lipid IVA lauroyl-ACP acyltransferase; not under heat shock regulation; membrane protein affecting cell division, growth, and high-temperature survival[2]

Product Synonyms(s)

lauryl-acyl carrier protein (ACP)-dependent acyltransferase[1], B1054[3][1], WaaM[3][1], HtrB[3][1], LpxL[3][1] , ECK1039, htrB, JW1041, waaM, b1054

Function from GO

<GO_nr />

Knock-Out Phenotype

Does not affect growth at low temperatures but causes a loss of viability at high temperatures in rich media (see PMID:1358874[4])

Regulation/Expression

transcription unit(s): lpxL[3]

Regulation/Activity
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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ Karow, M et al. (1992) The lethal phenotype caused by null mutations in the Escherichia coli htrB gene is suppressed by mutations in the accBC operon, encoding two subunits of acetyl coenzyme A carboxylase. J. Bacteriol. 174 7407-18 PubMed
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