tonB:Quickview: Difference between revisions

Latest revision as of 21:45, 27 May 2013

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Quickview

Gene

Standard Name	tonB
Gene Synonym(s)	ECK1246, b1252, JW5195, T1rec, exbA^[1], exbA
Product Desc.	TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins^[2]^[3]; Component of TonB energy transducing system^[3]; Outer Membrane Ferric Citrate Transport System^[3]; Outer Membrane Ferrichrome Transport System^[3]; Outer Membrane Ferric Enterobactin Transport System^[3]; vitamin B12 outer membrane transport complex^[3]; ferric dicitrate uptake system^[3]; ferrichrome uptake system^[3]; Ferric Enterobactin Transport System^[3]; vitamin B12 transport system^[3] Uptake of chelated Fe(2+) and cyanocobalamin; works in conjunction with OM receptors; energy transducer; sensitivity to T1, phi80, and colicins; forms a complex with ExbB and ExbD^[4]
Product Synonyms(s)	membrane spanning protein in TonB-ExbB-ExbD complex^[1], B1252^[2]^[1], ExbA^[2]^[1], TonB^[2]^[1] , ECK1246, exbA, JW5195, T1rec, b1252
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): tonB^[2], OP00228
Regulation/Activity
Quick Links
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Notes

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Periplasmic TonB is anchored to the cytoplasmic membrane by a signal anchor and interacts with outer membrane proteins, thus TonB spans the periplasmic space. TonB contains 40 proline residues (17%).^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.00 ^3.01 ^3.02 ^3.03 ^3.04 ^3.05 ^3.06 ^3.07 ^3.08 ^3.09 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] 3.00 ^3.01 ^3.02 ^3.03 ^3.04 ^3.05 ^3.06 ^3.07 ^3.08 ^3.09 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[1]

[2]

[3]

[4]

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+-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
 <noinclude>{{TabsTop}}
 {{Tab On|Quickview|tonB}}{{Tab|Gene|tonB}}{{Tab|Gene Product(s)|tonB}}{{Tab|Expression|tonB}}{{Tab|Evolution|tonB}}{{Tab|On One Page|tonB}}{{TabsBottom}}
 {|
 |- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
+|{{Sub}}[[#References| References]]
 |{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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+{|   id="M49b026dbc6f2f"  class=" tableEdit New_Quickview_Table"
 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[tonB:Gene|''tonB]]'' (synonyms: ''ECK1246, b1252, JW5195, T1rec, exbA'')<ref name='LIB:Riley_2006'/>
+''tonB''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[tonB:Gene_Product(s)|TonB product]]<ref name='LIB:Riley_2006'/>: membrane spanning protein in TonB-ExbB-ExbD complex<ref name='LIB:Riley_2006'/>, B1252<ref name='LIB:EcoCyc10.6'/>, ExbA<ref name='LIB:EcoCyc10.6'/>, TonB<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:TonB energy transducing system|TonB energy transducing system]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:Outer Membrane Ferric Citrate Transport System|Outer Membrane Ferric Citrate Transport System]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:Outer Membrane Ferrichrome Transport System|Outer Membrane Ferrichrome Transport System]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:Outer Membrane Ferric Enterobactin Transport System|Outer Membrane Ferric Enterobactin Transport System]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:vitamin B12 outer membrane transport complex|vitamin B12 outer membrane transport complex]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:ferric dicitrate uptake system|ferric dicitrate uptake system]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:ferrichrome uptake system|ferrichrome uptake system]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:Ferric Enterobactin Transport System|Ferric Enterobactin Transport System]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:vitamin B12 transport system|vitamin B12 transport system]]<ref name='LIB:EcoCyc11.1'/>
+''ECK1246, b1252, JW5195, T1rec, exbA''<ref name='LIB:Riley_2006'/>, exbA''
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
-TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
+Component of [[:Category:Complex:TonB energy transducing system|TonB energy transducing system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Outer Membrane Ferric Citrate Transport System|Outer Membrane Ferric Citrate Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Outer Membrane Ferrichrome Transport System|Outer Membrane Ferrichrome Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Outer Membrane Ferric Enterobactin Transport System|Outer Membrane Ferric Enterobactin Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:vitamin B12 outer membrane transport complex|vitamin B12 outer membrane transport complex]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:ferric dicitrate uptake system|ferric dicitrate uptake system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:ferrichrome uptake system|ferrichrome uptake system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Ferric Enterobactin Transport System|Ferric Enterobactin Transport System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:vitamin B12 transport system|vitamin B12 transport system]]<ref name='LIB:EcoCyc11.1'/>
+Uptake of chelated Fe(2+) and cyanocobalamin; works in conjunction with OM receptors; energy transducer; sensitivity to T1, phi80, and colicins; forms a complex with ExbB and ExbD<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''membrane spanning protein in TonB-ExbB-ExbD complex<ref name='LIB:Riley_2006'/>, B1252<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TonB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1246, exbA, JW5195, T1rec, b1252''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
-transcription unit(s): [[:Category:txn_units:tonB|tonB]]<ref name='LIB:EcoCyc10.6'/>, OP00228
+transcription unit(s): [[:Category:Txn_unit:tonB|tonB]]<ref name='LIB:EcoCyc10.6'/>, OP00228
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
 |-
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tonB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11012]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001001&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tonB&loc=MG1655%3A1309113..1309832,W3110%3A1312803..1313522,DH10B%3A1398509..1399228,REL606%3A1308683..1309402,BW2952%3A1199962..1200681]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1199962&end=1200681&gene=tonB&aa=mtldlprrfpwptllsvcihgavvagllytsvhqvielpapaqpisvtmvtpadleppqavqpppepvvepepepepipeppkeapvviekpkpkpkpkpkpvkkvqeqpkrdvkpvesrpaspfentaparltsstataatskpvtsvasgpralsrnqpqyparaqalriegqvkvkfdvtpdgrvdnvqilsakpanmferevknamrrwryepgkpgsgivvnilfkingtteiq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tonB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tonB]]&nbsp;&nbsp;
+|- class="tableEdit_footer"
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+{{Quickview_table_help}}
 <protect><!--Quickview_notes--></protect>
-==Notes==
+===Notes===
+{{BacktoTop}}
+Periplasmic TonB is anchored to the cytoplasmic membrane by a signal anchor and interacts with outer membrane proteins, thus TonB spans the periplasmic space.  TonB contains 40 proline residues (17%).<ref name='LIB:EcoGene'/>
 <noinclude>
 ==References==
+{{BacktoTop}}
 <references/>
 </noinclude>

tonB:Quickview: Difference between revisions

Latest revision as of 21:45, 27 May 2013

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