recJ:Quickview: Difference between revisions

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{|   id="H49b0220270852"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[recJ:Gene|''recJ]]'' (synonyms: ''ECK2887, b2892, JW2860'')<ref name='LIB:Riley_2006'/>
''recJ''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[recJ:Gene_Product(s)|RecJ product]]<ref name='LIB:Riley_2006'/>: ssDNA exonuclease, 5' --> 3'-specific product, B2892 product
''ECK2887, b2892, JW2860''<ref name='LIB:Riley_2006'/>, JW2860''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


ssDNA 5'-3' exonuclease involved in recombination<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''ssDNA exonuclease, 5' --> 3'-specific<ref name='LIB:Riley_2006'/>, B2892<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2887, JW2860, b2892''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:dsbC-recJ-prfB|dsbC-recJ-prfB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:dsbC-recJ-prfB|dsbC-recJ-prfB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=recJ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10830]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000821&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=recJ&loc=MG1655%3A3036128..3034395,W3110%3A3036762..3035029,REL606%3A2923859..2922126,DH10B%3A3129998..3128265,BW2952%3A2921543..2923276]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2921543&end=2923276&gene=recJ&aa=mkqqiqlrrrevdetadlpaelppllrrlyasrgvrsaqelersvkgmlpwqqlsgvekaveilynafregtriivvgdfdadgatstalsvlamrslgcsnidylvpnrfedgyglspevvdqahargaqlivtvdngisshagveharslgipvivtdhhlpgdtlpaaeaiinpnlrdcnfpskslagvgvafylmlalrtflrdqgwfderniaipnlaelldlvalgtvadvvpldannriltwqgmsriragkcrpgikallevanrdaqklaasdlgfalgprlnaagrlddmsvgvalllcdnigearvlaneldalnqtrkeieqgmqiealtlceklersrdtlpgglamyhpewhqgvvgilasrikerfhrpviafapagdgtlkgsgrsiqglhmrdalerldtlypgmmlkfgghamaaglsleedkfklfqqrfgelvtewldpsllqgevvsdgplspaemtmevaqllrdagpwgqmfpeplfdghfrllqqrlvgerhlkvmvepvgggplldgiafnvdtalwpdngvrevqlaykldinefrgnrslqiiidniwpi]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recJ+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=recJ]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Lovett and Kolodner (1989) N-terminally sequenced RecJ, but the native RBS was not used to direct translation, so it has been removed from the Verified Set. theless, the GTG start codon has been confirmed by mutational analysis in Haggerty and Lovett (1997).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

recJ

Gene Synonym(s)

ECK2887, b2892, JW2860[1], JW2860

Product Desc.

RecJ[2][3]

ssDNA 5'-3' exonuclease involved in recombination[4]

Product Synonyms(s)

ssDNA exonuclease, 5' --> 3'-specific[1], B2892[2][1], RecJ[2][1] , ECK2887, JW2860, b2892

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dsbC-recJ-prfB[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Lovett and Kolodner (1989) N-terminally sequenced RecJ, but the native RBS was not used to direct translation, so it has been removed from the Verified Set. theless, the GTG start codon has been confirmed by mutational analysis in Haggerty and Lovett (1997).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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