aaeB:Quickview: Difference between revisions

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{|   id="P49aedeb1b5313"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[aaeB:Gene|''aaeB]]'' (synonyms: ''ECK3229, b3240, JW3209, yhcP'')<ref name='LIB:Riley_2006'/>
''aaeB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[aaeB:Gene_Product(s)|AaeB product]]<ref name='LIB:Riley_2006'/>: p-hydroxybenzoic acid efflux system component product, B3240 product, YhcP product
''ECK3229, b3240, JW3209, yhcP''<ref name='LIB:Riley_2006'/>, yhcP''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System|AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System|AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System]]<ref name='LIB:EcoCyc11.1'/>


AaeAB p-hydroxybenzoic acid efflux pump PET component; efflux protein family<ref name='LIB:EcoGene'/>
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''p-hydroxybenzoic acid efflux system component<ref name='LIB:Riley_2006'/>, B3240<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AaeB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhcP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3229, JW3209, yhcP, b3240''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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'''Biological Process'''
* GO:0006810 transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0046942 carboxylic acid transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0042221 response to chemical stimulus ([http://www.geneontology.org/GO.evidence.shtml IGI])


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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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!align=left {{table_heading_style}} |Regulation/Activity
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transcription unit(s): [[:Category:Txn_unit:aaeB|aaeB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:aaeB|aaeB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=aaeB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7685]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004232&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=aaeB&loc=MG1655%3A3386210..3384243,W3110%3A3388043..3386076,REL606%3A3314118..3316085,BW2952%3A3271391..3273358]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3271391&end=3273358&gene=aaeB&aa=mgifsianqhirfavklataivlalfvgfhfqletprwavltaaivaagtafaaggepysgairyrgflriigtfigciaglviiiamirapllmilvcciwagfctwisslvriensyawglagytaliivitiqpeplltpqfavercseivigivcaimadllfsprsikqevdrelesllvaqyqlmqlcikhgdgevvdkawgdlvrrttalqgmrsnlnmessrwaranrrlkaintlsltlitqscetyliqntrpelitdtfreffdtpvetaqdvhkqlkrlrrviawtgeretpvtiyswvaaatryqllkrgvisntkinateeeilqgepevkvesaerhhamvnfwrttlscilgtlfwlwtgwtsgsgamvmiavvtslamrlpnprmvaidfiygtlaalplgllyflviipntqqsmlllcislavlgfflgievqkrrlgsmgalastiniivldnpmtfhfsqfldsalgqivgcvlaftvillvrdksrdrtgrvllnqfvsaavsamttnvarrkenhlpalyqqlfllmnkfpgdlpkfrlaltmiiahqrlrdapipvnedlsafhrqmrrtadhvisarsddkrrryfgqlleeleiyqeklriwqappqvtepvnrlagmlhkyqhaltds]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=aaeB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=aaeB]]&nbsp;&nbsp;


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===Notes===
===Notes===
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AaeAB also exports related aromatic carboxylic acids.  The aaeB gene is paralogous to ydhK.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

aaeB

Gene Synonym(s)

ECK3229, b3240, JW3209, yhcP[1], yhcP

Product Desc.

AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein B[2][3];

Component of AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System[3]

AaeAB p-hydroxybenzoic acid efflux pump PET component; efflux protein family[4]

Product Synonyms(s)

p-hydroxybenzoic acid efflux system component[1], B3240[2][1], AaeB[2][1], YhcP[2][1] , ECK3229, JW3209, yhcP, b3240

Function from GO

<GO_nr />

Knock-Out Phenotype

Biological Process

Regulation/Expression
Regulation/Activity

transcription unit(s): aaeB[2]

Quick Links



        

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Notes

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AaeAB also exports related aromatic carboxylic acids. The aaeB gene is paralogous to ydhK.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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