minD:Quickview: Difference between revisions

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Quickview

Standard Name	minD
Gene Synonym(s)	ECK1163, b1175, JW1164, minB^[1], minB
Product Desc.	membrane ATPase of the MinC-MinD-MinE system that regulates septum placement^[2]^[3] Inhibition of FtsZ ring polymerization; membrane ATPase that activates MinC; forms membrane-associated coiled arrays on the cytoplasmic face of the inner membrane, more concentrated at the poles^[4]
Product Synonyms(s)	membrane ATPase of the MinC-MinD-MinE system^[1], B1175^[2]^[1], MinB^[2]^[1], MinD^[2]^[1] , ECK1163, JW1164, minB, b1175
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): minCDE^[2]
Regulation/Activity
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Notes

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The membrane localization of MinD is mediated by an 8-12 residue C-terminal motif, the membrane targeting sequence (MTS), mutations in this region prevent membrane localization, but not MinC binding. MinD contains switch I and II regions (regions that undergo nucleotide-dependent conformational changes responsible for interactions with their partners) involved in MinC interactions. MinCD oscillates (migrates) between coating one half of the cell's membrane (minE ring to pole) to coating the other half every 40 secs, and this may help to identify the cell center. Overexpression causes filamentous biofilm formation.^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[1]

[2]

[3]

[4]

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-{|{{Prettytable}}
+{|   id="I49aeecb6b8763"  class=" tableEdit New_Quickview_Table"
 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[minD:Gene|''minD]]'' (synonyms: ''ECK1163, b1175, JW1164, minB'')<ref name='LIB:Riley_2006'/>
+''minD''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[minD:Gene_Product(s)|MinD product]]<ref name='LIB:Riley_2006'/>: membrane ATPase of the MinC-MinD-MinE system product, B1175 product, MinB product
+''ECK1163, b1175, JW1164, minB''<ref name='LIB:Riley_2006'/>, minB''
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
 membrane ATPase of the MinC-MinD-MinE system that regulates septum placement<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Inhibition of FtsZ ring polymerization; membrane ATPase that activates MinC; forms membrane-associated coiled arrays on the cytoplasmic face of the inner membrane, more concentrated at the poles<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''membrane ATPase of the MinC-MinD-MinE system<ref name='LIB:Riley_2006'/>, B1175<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MinB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MinD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1163, JW1164, minB, b1175''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
 transcription unit(s): [[:Category:Txn_unit:minCDE|minCDE]]<ref name='LIB:EcoCyc10.6'/>
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
 |-
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=minD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10597]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000590&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=minD&loc=MG1655%3A1224584..1223772,W3110%3A1226938..1226126,DH10B%3A1264825..1264013,REL606%3A1225522..1224710,BW2952%3A1112493..1113305]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1112493&end=1113305&gene=minD&aa=mariivvtsgkggvgkttssaaiatglaqkgkktvvidfdiglrnldlimgcerrvvydfvnviqgdatlnqalikdkrtenlyilpasqtrdkdaltregvakvlddlkamdfefivcdspagietgalmalyfadeaiittnpevssvrdsdrilgilasksrraengeepikehllltrynpgrvsrgdmlsmedvleilriklvgvipedqsvlrasnqgepvildinadagkayadtverllgeerpfrfieeekkgflkrlfgg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=minD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=minD]]&nbsp;&nbsp;
+|- class="tableEdit_footer"
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4089.I49aeecb6b8763&page=4089&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
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 {{Quickview_table_help}}
 <protect><!--Quickview_notes--></protect>
 ===Notes===
 {{BacktoTop}}
+The membrane localization of MinD is mediated by an 8-12 residue C-terminal motif, the membrane targeting sequence (MTS), mutations in this region prevent membrane localization, but not MinC binding.  MinD contains switch I and II regions (regions that undergo nucleotide-dependent conformational changes responsible for interactions with their partners) involved in MinC interactions.  MinCD oscillates (migrates) between coating one half of the cell's membrane (minE ring to pole) to coating the other half every 40 secs, and this may help to identify the cell center. Overexpression causes filamentous biofilm formation.<ref name='LIB:EcoGene'/>
@@ Line 63: / Line 81: @@
 ==References==
 {{BacktoTop}}
-{{RefHelp}}
 <references/>
 </noinclude>

minD:Quickview: Difference between revisions

Latest revision as of 21:48, 27 May 2013

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