hyuA:Quickview: Difference between revisions

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{|   id="H49aee9b26b929"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[hyuA:Gene|''hyuA]]'' (synonyms: ''ECK2869, b2873, JW2841, ygeZ'')<ref name='LIB:Riley_2006'/>
''hyuA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[hyuA:Gene_Product(s)|HyuA product]]<ref name='LIB:Riley_2006'/>: D-stereospecific phenylhydantoinase product, B2873 product, YgeZ product
''ECK2869, b2873, JW2841, ygeZ''<ref name='LIB:Riley_2006'/>, ygeZ''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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phenylhydantoinase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
phenylhydantoinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:phenylhydantoinase|phenylhydantoinase]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:phenylhydantoinase|phenylhydantoinase]]<ref name='LIB:EcoCyc11.1'/>


D-stereospecific phenylhydantoinase; physiological function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''D-stereospecific phenylhydantoinase<ref name='LIB:Riley_2006'/>, B2873<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HyuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2869, JW2841, ygeZ, b2873''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hyuA|hyuA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hyuA|hyuA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hyuA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7492]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004055&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hyuA&loc=MG1655%3A3008050..3009435,W3110%3A3008684..3010069,DH10B%3A3101920..3103305,REL606%3A2895783..2897168,BW2952%3A2895198..2896583]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2895198&end=2896583&gene=hyuA&aa=mefamrvlikngtvvnadgqakqdlliesgivrqlgnnispqlpyeeidatgcyvfpggvdvhthfnidvgiarscddfftgtraaacggtttiidhmgfgpngcrlrhqlevyrgyaahkavidysfhgviqhinhaildeipmiveeglssfklyltyqyklnddevlqalrrlhesgalttvhpendaaiaskraefiaagltapryhalsrpleceaeaiarminlaqiagnaplyivhlsnglgldylrlaranhqpvwvetcpqyllldersydtedgmkfilspplrnvreqdklwcgisdgaidvvatdhctfsmaqrlqiskgdfsrcpnglpgvenrmqllfssgvmtgritperfveltsamparlfglwpqkgllapgsdgdvviidprqsqqiqhrhlhdnadyspwegftcqgaivrtlsrgetifcdgtftgkagrgrflrrkpfvppvl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hyuA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hyuA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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YgeZ is tetrameric.  The upstream TTG may be utilized in vivo, although the ATG indicated here is a more likely in vivo start.  The overexpressed, N-terminally sequenced protein was synthesized with an artificial RBS for the TTG start. Native protein N-terminus has not been determined.  AFMB Structural Genomics target No. 92 (http://afmb.cnrs-mrs.fr/article171.html).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hyuA

Gene Synonym(s)

ECK2869, b2873, JW2841, ygeZ[1], ygeZ

Product Desc.

phenylhydantoinase[2][3];

Component of phenylhydantoinase[3]

D-stereospecific phenylhydantoinase; physiological function unknown[4]

Product Synonyms(s)

D-stereospecific phenylhydantoinase[1], B2873[2][1], YgeZ[2][1], HyuA[2][1] , ECK2869, JW2841, ygeZ, b2873

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hyuA[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


YgeZ is tetrameric. The upstream TTG may be utilized in vivo, although the ATG indicated here is a more likely in vivo start. The overexpressed, N-terminally sequenced protein was synthesized with an artificial RBS for the TTG start. Native protein N-terminus has not been determined. AFMB Structural Genomics target No. 92 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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