dtd:Gene Product(s): Difference between revisions

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|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Domains/Motifs/Modification Sites|Domains]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Gene Product Resources|Resources]]
|{{Sub}}[[#Gene Product Resources|Resources]]
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|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
|}
</noinclude>[[Category:GO:0005737_!_cytoplasm]][[Category:GO:0009451_!_RNA modification]][[Category:GO:0006805_!_xenobiotic metabolic process]][[Category:GO:0006399_!_tRNA metabolic process]]
</noinclude>
==Nomenclature==
==Nomenclature==
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|-
|-
!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
|
||
Dtd product
Dtd  
|-
|-
!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
|
||
D-tyr-tRNA(Tyr) deacylase product<ref name='LIB:Riley_2006'/>, B3887 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dtd product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihZ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''D-tyr-tRNA(Tyr) deacylase<ref name='LIB:Riley_2006'/>, B3887<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dtd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3880, JW3858, yihZ, b3887''
|-
|-
!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
|
||
D-Tyr-tRNA<sup>Tyr</sup> deacylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
D-Tyr-tRNA<sup>Tyr</sup> deacylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  


Component of ; [[:Category:Complex:D-Tyr-tRNA<sup>Tyr</sup> deacylase|D-Tyr-tRNA<sup>Tyr</sup> deacylase]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:D-Tyr-tRNA<sup>Tyr</sup> deacylase|D-Tyr-tRNA<sup>Tyr</sup> deacylase]]<ref name='LIB:EcoCyc11.1'/>


D-tyrosine tRNA deacylase; also removes other, e.g. D-Trp and D-Asp, toxic D-amino acids from tRNA; dimer<ref name='LIB:EcoGene'/>
|-
|-
!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
|
||
** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.1.-.- 3.1.-.-]<ref name='LIB:Riley_2006'/>
* [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.-.- 3.1.-.-]<ref name='LIB:Riley_2006'/>
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===Notes===
===Notes===
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<big>'''Gene Ontology'''</big>
<big>'''Gene Ontology'''</big><br /><!--box uid=421aa90e079fa326b6494f812ad13e79.28394.Z46ab0aa229783-->
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|-  
|
|
 
|
|
GO:0005737  
GO:0005737
|
|
cytoplasm  
cytoplasm
|
|
GOA:hamap<br />GO_REF:0000020
|
|
IEA: Inferred from Electronic Annotation
|
|
HAMAP:MF_00518
|
|
C  
C
|
|
Seeded from Riley et  al 2006 <ref name='LIB:Riley_2006'/>.  
Seeded from [[EcoCyc]] (v14.0)
|
|
required fields missing 
complete
|-
|-  
|
|
 
|
|
GO:0009451  
GO:0009451  
|
|
RNA modification  
RNA modification
|
|
 
|
|
 
|
|
 
|
|
P  
P
|
|
Seeded from Riley et  al 2006 <ref name='LIB:Riley_2006'/>.  
Seeded from Riley et  al 2006 <ref name='LIB:Riley_2006'/>.  
|
|
required fields missing 
Missing: evidence, reference
|-
|-
|
 
|
GO:0005737
|
cytoplasm
|
GOA:interpro<br />GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR003732
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0005737
|
cytoplasm
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0963
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0005737
|
cytoplasm
|
GO_REF:0000023
|
IEA: Inferred from Electronic Annotation
|
SP_SL:SL-0086
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0016787
|
hydrolase activity
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0378
|
F
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0016788
|
hydrolase activity, acting on ester bonds
|
GOA:hamap<br />GO_REF:0000020
|
IEA: Inferred from Electronic Annotation
|
HAMAP:MF_00518
|
F
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0016788
|
hydrolase activity, acting on ester bonds
|
GOA:interpro<br />GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR003732
|
F
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-  
|
|
 
|
|
GO:0006805
GO:0019478
|
|
xenobiotic metabolic process  
D-amino acid catabolic process
|
|
GOA:hamap<br />GO_REF:0000020
|
|
IEA: Inferred from Electronic Annotation
|
|
HAMAP:MF_00518
|
|
P  
P
|
|
Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.  
Seeded from [[EcoCyc]] (v14.0)
|
|
required fields missing 
complete
|-
|-  
|
|
 
|
|
GO:0006399
GO:0019478
|
|
tRNA metabolic process  
D-amino acid catabolic process
|
|
GOA:interpro<br />GO_REF:0000002
|
|
IEA: Inferred from Electronic Annotation
|
|
InterPro:IPR003732
|
|
P  
P
|
|
Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.  
Seeded from [[EcoCyc]] (v14.0)
|
|
required fields missing 
complete
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<span id="Interactions"></span><big>'''Interactions'''</big>
<span id="Interactions"></span><big>'''Interactions'''</big>
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!Partner Type!!Partner!!Notes
!|Partner Type!!Partner!!Notes!!References!!Evidence
|-
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Protein
Protein
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Subunits of [[:Category:Complex:D-Tyr-tRNA<sup>Tyr</sup> deacylase|D-Tyr-tRNA<sup>Tyr</sup> deacylase]]  
Subunits of [[:Category:Complex:D-Tyr-tRNA<sup>Tyr</sup> deacylase|D-Tyr-tRNA<sup>Tyr</sup> deacylase]]  
|
|
could be indirect   
could be indirect  
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|
   
|-
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Protein
|
cca<br />
|
 
|
PMID:15690043
|
Experiment(s):EBI-879990<br />
|-
|
Protein
|
rplC<br />
|
 
|
PMID:15690043
|
Experiment(s):EBI-885002<br />
|-
|
Protein
|
rplV<br />
|
 
|
PMID:15690043
|
Experiment(s):EBI-885002<br />
|-
|
Protein
|
yihI<br />
|
 
|
PMID:15690043
|
Experiment(s):EBI-885002<br />
|-
|
Protein
|
stpA<br />
|
 
|
PMID:16606699
|
Experiment(s):EBI-1146884<br />
|-
|
Protein
|
rplS<br />
|
 
|
PMID:16606699
|
Experiment(s):EBI-1146884<br />
|-
|
Protein
|
rplN<br />
|
 
|
PMID:16606699
|
Experiment(s):EBI-1146884<br />
|-
|
Protein
|
yihI
|
 
|
PMID:19402753
|
LCMS(ID Probability):99.6
 
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<!--Function_notes--></protect>
<!--Function_notes--></protect>
===Notes===
===Notes===
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==Localization==
==Localization==
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!Compartment!!Description!!Evidence!!Notes
!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
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<span id="Sequence"></span><big>'''Physical Properties'''</big>
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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|-
!align=left {{table heading style}} |Name
||
 
|-
|-
!{{table heading style}} |Sequence
!align=left {{table heading style}} |Sequence
|
||
[http://biocyc.org/ECOLI/sequence-aa?object=EG11852-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=EG11852-MONOMER at EcoCyc]  
<pre>MIALIQRVTR ASVTVEGEVT GEIGAGLLVL LGVEKDDDEQ KANRLCERVL GYRIFSDAEG
<pre>MIALIQRVTR ASVTVEGEVT GEIGAGLLVL LGVEKDDDEQ KANRLCERVL GYRIFSDAEG
Line 201: Line 443:
QTGRFAADMQ VSLVNDGPVT FWLQV</pre>  
QTGRFAADMQ VSLVNDGPVT FWLQV</pre>  
|-
|-
!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Length
|
||
15.95 kDa (calc) <ref name='LIB:EcoCyc10.6'/>
145
|-
|-
!{{table heading style}} |pI
!align=left {{table heading style}} |Mol. Wt
|
||
15.949 kDa
|-
|-
!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |pI
|
||
9970 - 10220 (calc based on 3 Y, 1 W, and 2 C residues)  
4.6 (calculated)
|-
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!align=left {{table heading style}} |Extinction coefficient
||
9,970 - 10,220 (calc based on 3 Y, 1 W, and 2 C residues)
 
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<big>'''Domains/Motifs/Modification Sites'''</big>
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!Type!!Residues!!Description!!Notes
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<span id="Structure"></span><big>'''Structure'''</big>
<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span><table>
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|- {{table heading style}}
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
!|Type!!Residues!!Description!!Notes!!References
|-
|-  
|
Domain
|
|
X-RAY DIFFRACTION
2..145
|
|
Escherichia coli
[http://pfam.janelia.org/family/PF02580 PF02580 D-Tyr-tRNA(Tyr) deacylase]
   
|
|
[http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1JKE 1JKE] D-Tyr tRNATyr deacylase from Escherichia coli
 
|
|
PMID:19920124
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<td>
<!-- motifs column 2-->
   
   
|
<motif_map/>
 
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<table><tr valign='top'><td>
<span id='Structure'></span><big>'''Structure'''</big><br />
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|-
!align=left {{table heading style}} |Structures
||
<beststructure>
gene=dtd
taxon=562,83333
</beststructure>
|-
!align=left {{table heading style}} |Models
||
View models at:
* [http://www.proteinmodelportal.org/query/uniprot/P0A6M4 Protein Model Portal]
* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0A6M4 PSI-PRED (P0A6M4)]
* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0A6M4 Genomes TO Protein (P0A6M4)] (GTOP)
 
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<!--Structure_notes--></protect>
</td><td></protect>
==== Structure figures ====
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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===Notes===
===Notes===


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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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|-
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[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/protein/16131727 GI:16131727]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/protein/NP_418323.1 GeneID:948378]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[[ASAP]]
|
ASAP:ABE-0012690
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|
|
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
|
|
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11852-MONOMER EcoCyc:EG11852-MONOMER]
[http://www.uniprot.org/uniprot/P0A6M4 UniProtKB/Swiss-Prot:P0A6M4]
|
|
Escherichia coli str. K-12 substr. MG1655
|-
|-  
|
|
[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
[[EcoCyc]]
|
|
[http://www.expasy.ch/cgi-bin/sprot-search-ac?P0A6M4 UniProt:P0A6M4] 
EcoCyc:EG11852
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|-  
|
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
[[EcoGene]]
|
|
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02580 PFAM:PF02580] 
EcoGene:EG11852
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|-  
|
|
[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
|
|
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_418323 RefSeq:NP_418323]
[http://www.ncbi.nlm.nih.gov/gene?term=948378 GeneID:948378]
|
|
Escherichia coli str. K-12 substr. MG1655
|-
|-  
|
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[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])
[[RegulonDB]]
|
|
[http://salilab.org/modbase/searchbyid?databaseID=P0A6M4 ModBase:P0A6M4] 
RegulonDB:ECK120001783
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
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[http://www.rcsb.org/pdb PDB] ([[PDB|EcoliWiki Page]])
[[EchoBASE]]
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|
[http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1JKE PDB:1JKE] 
EchoBASE:EB1798
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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==References==
==References==
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__NOTOC__
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===Categories===
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[[Category:Proteins]]

Latest revision as of 21:09, 17 February 2015

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

Dtd

Synonyms

D-tyr-tRNA(Tyr) deacylase[1], B3887[2][1], Dtd[2][1], YihZ[2][1] , ECK3880, JW3858, yihZ, b3887

Product description

D-Tyr-tRNATyr deacylase[2][3];

Component of [[:Category:Complex:D-Tyr-tRNATyr deacylase|D-Tyr-tRNATyr deacylase]][3]

D-tyrosine tRNA deacylase; also removes other, e.g. D-Trp and D-Asp, toxic D-amino acids from tRNA; dimer[4]

EC number (for enzymes)
edit table


Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00518

C

Seeded from EcoCyc (v14.0)

complete

GO:0009451

RNA modification

P

Seeded from Riley et al 2006 [1].

Missing: evidence, reference

GO:0005737

cytoplasm

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003732

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

Seeded from EcoCyc (v14.0)

complete

GO:0016787

hydrolase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0378

F

Seeded from EcoCyc (v14.0)

complete

GO:0016788

hydrolase activity, acting on ester bonds

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00518

F

Seeded from EcoCyc (v14.0)

complete

GO:0016788

hydrolase activity, acting on ester bonds

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003732

F

Seeded from EcoCyc (v14.0)

complete

GO:0019478

D-amino acid catabolic process

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00518

P

Seeded from EcoCyc (v14.0)

complete

GO:0019478

D-amino acid catabolic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003732

P

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of [[:Category:Complex:D-Tyr-tRNATyr deacylase|D-Tyr-tRNATyr deacylase]]

could be indirect

Protein

cca

PMID:15690043[5]

Experiment(s):EBI-879990

Protein

rplC

PMID:15690043[5]

Experiment(s):EBI-885002

Protein

rplV

PMID:15690043[5]

Experiment(s):EBI-885002

Protein

yihI

PMID:15690043[5]

Experiment(s):EBI-885002

Protein

stpA

PMID:16606699[6]

Experiment(s):EBI-1146884

Protein

rplS

PMID:16606699[6]

Experiment(s):EBI-1146884

Protein

rplN

PMID:16606699[6]

Experiment(s):EBI-1146884

Protein

yihI

PMID:19402753[7]

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MIALIQRVTR ASVTVEGEVT GEIGAGLLVL LGVEKDDDEQ KANRLCERVL GYRIFSDAEG
KMNLNVQQAG GSVLVVSQFT LAADTERGMR PSFSKGASPD RAEALYDYFV ERCRQQEMNT
QTGRFAADMQ VSLVNDGPVT FWLQV
Length

145

Mol. Wt

15.949 kDa

pI

4.6 (calculated)

Extinction coefficient

9,970 - 10,220 (calc based on 3 Y, 1 W, and 2 C residues)

edit table


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

2..145

PF02580 D-Tyr-tRNA(Tyr) deacylase

PMID:19920124[8]

edit table

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=dtd taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131727

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948378

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012690

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0A6M4

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11852

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11852

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948378

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001783

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1798

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
  6. ↑ 6.0 6.1 6.2 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  7. ↑ Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  8. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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