cvrA:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[cvrA:Gene|''cvrA]]'' (synonyms: ''ECK1179, b1191, JW5184, ycgO'')<ref name='LIB:Riley_2006'/>
''cvrA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[cvrA:Gene_Product(s)|CvrA product]]<ref name='LIB:Riley_2006'/>: predicted cation/proton antiporter product, B1191 product, YcgO product
''ECK1179, b1191, JW5184, ycgO''<ref name='LIB:Riley_2006'/>, ycgO''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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YcgO CPA1 Transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
YcgO CPA1 Transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Required for growth at low osmolarity; similar to eukaryotic Na+/H+ exchangers, but not involved in Na+ extrusion; proposed to be involved in the regulation of cell volume<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted cation/proton antiporter<ref name='LIB:Riley_2006'/>, B1191<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CvrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcgO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1179, JW5184, ycgO, b1191''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cvrA|cvrA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cvrA|cvrA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cvrA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6620]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003215&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cvrA&loc=MG1655%3A1241294..1239558,W3110%3A1243648..1241912,DH10B%3A1281535..1279799,REL606%3A1240485..1242221,BW2952%3A1128279..1130015]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1128279&end=1130015&gene=cvrA&aa=mlagvdgvggipfdnypfaymvsnlalaiilldggmrtqassfrvalgpalslatlgvlitsgltgmmaawlfnldlieglligaivgstdaaavfsllggkglnervgstleiesgsndpmavfltitliamiqhhesniswmfivdilqqfglgiviglgggylllqminrialpaglypllalsggilifslttalegsgilavylcgfllgnrpirnrygilqnfdglawlaqiamflvlgllvnpsdllpiaipalilsawmiffarplsvfagllpfrgfnlrervfiswvglrgavpiilavfpmmaglenarlffnvaffvvlvslllqgtslswaakkakvvvppvgrpvsrvgldihpenpweqfvyqlsadkwcvgaalrdlhmpketriaalfrdnqllhptgstrlregdvlcvigrerdlpalgklfsqsppvaldqrffgdfileasakyadvaliygledgreyrdkqqtlgeivqqllgaapvvgdqvefagmiwtvaekednevlkigvrvaeeeaes]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cvrA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cvrA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cvrA

Gene Synonym(s)

ECK1179, b1191, JW5184, ycgO[1], ycgO

Product Desc.

YcgO CPA1 Transporter[2][3]

Required for growth at low osmolarity; similar to eukaryotic Na+/H+ exchangers, but not involved in Na+ extrusion; proposed to be involved in the regulation of cell volume[4]

Product Synonyms(s)

predicted cation/proton antiporter[1], B1191[2][1], CvrA[2][1], YcgO[2][1] , ECK1179, JW5184, ycgO, b1191

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cvrA[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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