Phage lambda orf60a:Gene Product(s): Difference between revisions

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{{Tab|Quickview|Phage lambda orf60a}}{{Tab|Gene|Phage lambda orf60a}}{{Tab On|Gene Product(s)|Phage lambda orf60a}}{{Tab|Expression|Phage lambda orf60a}}{{Tab|Evolution|Phage lambda orf60a}}{{Tab|On One Page|Phage lambda orf60a}}{{TabsBottom}}
{{Tab|Quickview|Phage lambda orf60a}}{{Tab|Gene|Phage lambda orf60a}}{{Tab On|Gene Product(s)|Phage lambda orf60a}}{{Tab|Expression|Phage lambda orf60a}}{{Tab|Evolution|Phage lambda orf60a}}{{Tab|On One Page|Phage lambda orf60a}}{{TabsBottom}}
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|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Domains/Motifs/Modification Sites|Domains]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Gene Product Resources|Resources]]
|{{Sub}}[[#Gene Product Resources|Resources]]
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==Nomenclature==
==Nomenclature==
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|-
|-
!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
|
||
orf60a
orf60a
|
orf60a  
|-
|-
!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
|
||
orf60a, lambdap39
orf60a, lambdap39
|
orf60a, lambdap39  
|-
|-
!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
|
||
hypothetical protein
 
|
hypothetical protein
hypothetical protein
|-
|-
!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
|
||


|


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==Function==
==Function==
{{BacktoTop}}
<protect>
<protect>
===Gene Ontology===
<big>'''Gene Ontology'''</big>
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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{{Product_GO_help}}
===Interactions===


{{Product_interactions_help}}
<span id="Interactions"></span><big>'''Interactions '''</big>
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!|Partner Type!!Partner!!Notes!!References!!Evidence
 
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<!--Function_notes-->
===Notes===
===Notes===


==Localization==
==Localization==
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!Compartment!!Description!!Evidence!!Notes
!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
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===Notes===
===Notes===


==Structure and Physical Properties==
==Structure and Physical Properties==
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<protect>
<protect>
===Physical Properties===
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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|-
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!{{table heading style}} |Sequence
!align=left {{table heading style}} |Name
|
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<pre>MTHPHDNIRV GAITFVYSVT KRGWVFPGLS VIRNPLKAQR LAEEINNKRG AVCTKHLLLS</pre>
|-
|-
!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Sequence
|
||
6.75 kDa (calc) 
<pre>MTHPHDNIRV GAITFVYSVT KRGWVFPGLS VIRNPLKAQR LAEEINNKRG AVCTKHLLLS</pre>
|-
|-
!{{table heading style}} |pI
!align=left {{table heading style}} |Length
|
||
60
|-
!align=left {{table heading style}} |Mol. Wt
||
6.754 kDa
|-
|-
!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |pI
|
||
10.7 (calculated)
|-
|-
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!align=left {{table heading style}} |Extinction coefficient
||
6,990 - 7,115 (calc based on 1 Y, 1 W, and 1 C residues)
 
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{{Product_physical_properties_help}}
===Domains/Motifs/Modification Sites===
 
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!|Type!!Residues!!Description!!Notes!!References
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{{Product_domains_motifs_help}}</td>
===Structure===
<td>
<!-- motifs column 2-->
<motif_map/>
</td>
</tr>
</table>
 
<table><tr valign='top'><td>
<span id='Structure'></span><big>'''Structure'''</big><br />
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!align=left {{table heading style}} |Structures
||
<beststructure>
gene=Phage_lambda_orf60a
taxon=10710
</beststructure>
|-
!align=left {{table heading style}} |Models
||
View models at:
* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
 
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<!--Structure_notes--></protect>
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==== Structure figures ====
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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===Notes===
===Notes===




==Gene Product Resources==
==Gene Product Resources==
{{BacktoTop}}
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<protect><!--Resources_notes--></protect>
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===Notes===
===Notes===


==Accessions in Other Databases==
==Accessions in Other Databases==
{{BacktoTop}}
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|- {{table_heading_style}}
|- {{table_heading_style}}
!Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-
 
|
|- class="tableEdit_footer"
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene Genbank] ([[Genbank|EcoliWiki Page]])
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..J46a4161154c8b&page=104016&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
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[http://www.ncbi.nlm.nih.gov/sites/entrez?db=protein&cmd=&term=NP_040615.1 Genbank:NP_040615.1] 
|
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==Links==
==Links==
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{{BacktoTop}}
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<noinclude>
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==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
{{BacktoTop}}

Latest revision as of 20:19, 17 February 2015

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

orf60a

Synonyms

orf60a, lambdap39

Product description

hypothetical protein

EC number (for enzymes)


edit table

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

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Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions

<protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MTHPHDNIRV GAITFVYSVT KRGWVFPGLS VIRNPLKAQR LAEEINNKRG AVCTKHLLLS
Length

60

Mol. Wt

6.754 kDa

pI

10.7 (calculated)

Extinction coefficient

6,990 - 7,115 (calc based on 1 Y, 1 W, and 1 C residues)

edit table

See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
edit table
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_lambda_orf60a taxon=10710 </beststructure>

Models

View models at:

edit table

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
edit table

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

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Name URL Comments
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See Help:Links_table for how to enter or edit information in this section of EcoliWiki.



References

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See Help:References for how to manage references in EcoliWiki.


Categories

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