rpsE:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00333 PF00333  Ribosomal protein S5, N-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03719 PF03719  Ribosomal protein S5, C-terminal domain]
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[[EcoCyc]]
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EcoCyc:EG10904
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10904
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000895
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0897
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010823
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000009664 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G33800 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000010843 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00037267 (score: 1.000; bootstrap: 100%)
  • WBGene00041867 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00008452 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000010468 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2454 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3401 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0215391 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0044510 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19229-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000272418 (score: 1.000; bootstrap: 57%)
  • ENSP00000332440 (score: 0.803)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000021341 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Mus musculus

  • MGI:3643279 (score: 1.000; bootstrap: 57%)
  • MGI:3647575 (score: 1.000; bootstrap: 56%)
  • MGI:3645604 (score: 0.983)
  • MGI:105110 (score: 0.983)
  • MGI:3645003 (score: 0.963)
  • MGI:3648968 (score: 0.955)
  • MGI:3647574 (score: 0.946)
  • MGI:3644876 (score: 0.933)
  • MGI:3647516 (score: 0.885)
  • MGI:3643826 (score: 0.838)
  • MGI:3645904 (score: 0.831)
  • MGI:3646785 (score: 0.551)
  • MGI:3648610 (score: 0.270)
  • MGI:3647821 (score: 0.231)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000020929 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR251W (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC4G97c (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000129380 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00033426001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPSE

From SHIGELLACYC

E. coli O157

RPSE

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR13718:SF60

Superfamily (EcoliWiki Page)

SUPERFAMILY:54211

Superfamily (EcoliWiki Page)

SUPERFAMILY:54768

Pfam (EcoliWiki Page)

PF00333 Ribosomal protein S5, N-terminal domain

Pfam (EcoliWiki Page)

PF03719 Ribosomal protein S5, C-terminal domain

EcoCyc

EcoCyc:EG10904

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10904

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000895

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0897

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010823

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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