grpE:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01025 PFAM:PF01025]
[http://pfam.janelia.org/family/PF01025 PF01025 GrpE]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=58014 SUPERFAMILY:58014]
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[[EcoCyc]]
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EcoCyc:EG10416
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10416
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000409
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0411
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008598
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000022118 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000015422 (score: 0.855)
  • ENSANGP00000025924 (score: 0.217)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000003920 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G26780 (score: 1.000; bootstrap: 87%)
  • AT5G55200 (score: 0.494)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013431 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000026575 (score: 0.260)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00031315 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007927 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000021192 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000027030 (score: 0.258)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-051120-111 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-051120-47 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0216255 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0014877 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19397-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025020 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000034032 (score: 0.334)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000264954 (score: 1.000; bootstrap: 100%)
  • ENSP00000329558 (score: 0.284)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000022370 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000003362 (score: 0.470)
  • ENSMMUP00000028526 (score: 0.307)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003595 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000000081 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000007152 (score: 0.296)

From Inparanoid:20070104

Mus musculus

  • MGI:1334417 (score: 1.000; bootstrap: 100%)
  • MGI:1334416 (score: 0.216)

From Inparanoid:20070104

Oryza gramene

  • Q5DPX9 (score: 1.000; bootstrap: 66%)
  • Q6Z0G0 (score: 0.706)
  • Q6EPR4 (score: 0.546)
  • Q5DPX8 (score: 0.515)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000027375 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000029729 (score: 0.284)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000008930 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000026495 (score: 0.226)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR232W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC3B99 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000131063 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000049520 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

GRPE

From SHIGELLACYC

E. coli O157

GRPE

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01025 GrpE

Superfamily (EcoliWiki Page)

SUPERFAMILY:51064

Panther (EcoliWiki Page)

PTHR21237:SF2

Superfamily (EcoliWiki Page)

SUPERFAMILY:58014

EcoCyc

EcoCyc:EG10416

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10416

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000409

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0411

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008598

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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