obgE:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01018 PFAM:PF01018]
[http://pfam.janelia.org/family/PF01926 PF01926  GTPase of unknown function]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01018 PF01018 GTP1/OBG]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11702:SF3 PTHR11702:SF3]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=82051 SUPERFAMILY:82051]
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[[EcoCyc]]
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EcoCyc:G7656
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12795
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120004206
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2647
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010462
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000019599 (score: 1.000; bootstrap: 62%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000013925 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G18570 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000019208 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00039357 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00010805 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000018521 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013362 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040718-153 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040718-175 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218031 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0032031 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA12249-PA (score: 1.000; bootstrap: 82%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008280 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000325608 (score: 1.000; bootstrap: 85%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000016552 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000020843 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2385599 (score: 1.000; bootstrap: 98%)
  • MGI:3644703 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q7EZT3 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000023577 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000011132 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YHR168W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAP8A31c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000168411 (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00023707001 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000004294 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

YHBZ

From SHIGELLACYC

E. coli O157

YHBZ

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01926 GTPase of unknown function

Pfam (EcoliWiki Page)

PF01018 GTP1/OBG

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Panther (EcoliWiki Page)

PTHR11702:SF3

Superfamily (EcoliWiki Page)

SUPERFAMILY:82051

EcoCyc

EcoCyc:G7656

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12795

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004206

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2647

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010462

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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