clpA:Evolution: Difference between revisions

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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="C46abb14ac8a70"  class=" tableEdit Evolution_homologs_table"   
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!|Organism!!Homologs (Statistics)!!Comments
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{|   id="U46abb14ced728"  class=" tableEdit Gene_accessions_table"   
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02861 PFAM:PF02861]
[http://pfam.janelia.org/family/PF00004 PF00004  ATPase family associated with various cellular activities (AAA)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02861 PF02861 Clp amino terminal domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52540 SUPERFAMILY:52540]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=81923 SUPERFAMILY:81923]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07724 PF07724  AAA domain (Cdc48 subfamily)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF10431 PF10431  C-terminal, D2-small domain, of ClpB protein ]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02861 PFAM:PF02861]
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[[EcoCyc]]
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EcoCyc:EG10156
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10156
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000152
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0154
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003001
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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!|Name!!URL!!Comments
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Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Tetraodon nigroviridis

  • GSTENP00038721001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

CLPA

From SHIGELLACYC

E. coli O157

CLPA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00004 ATPase family associated with various cellular activities (AAA)

Pfam (EcoliWiki Page)

PF02861 Clp amino terminal domain

Panther (EcoliWiki Page)

PTHR11638:SF14

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Superfamily (EcoliWiki Page)

SUPERFAMILY:81923

Pfam (EcoliWiki Page)

PF07724 AAA domain (Cdc48 subfamily)

Pfam (EcoliWiki Page)

PF10431 C-terminal, D2-small domain, of ClpB protein

PFAM (EcoliWiki Page)

PFAM:PF02861

EcoCyc

EcoCyc:EG10156

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10156

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000152

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0154

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003001

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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