relA:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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{| id="E49b0221316a9d" class=" tableEdit New_Quickview_Table" | {| id="E49b0221316a9d" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2778, b2784, JW2755, RC''<ref name='LIB:Riley_2006'/> | ''ECK2778, b2784, JW2755, RC''<ref name='LIB:Riley_2006'/>, RC'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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(p)ppGpp synthetase I/GTP pyrophosphokinase<ref name='LIB:Riley_2006'/>, B2784<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RelA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ppGpp synthase I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''(p)ppGpp synthetase I/GTP pyrophosphokinase<ref name='LIB:Riley_2006'/>, B2784<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RelA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ppGpp synthase I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2778, JW2755, RC, b2784'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=relA&loc=MG1655 | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=relA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10835]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000826&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=relA&loc=MG1655%3A2911673..2909439,W3110%3A2912307..2910073,REL606%3A2802579..2800345,DH10B%3A3005551..3001981,BW2952%3A2795251..2797257,BW2952%3A2798546..2798821]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2798546&end=2798821&gene=relA&aa=mvavrsahinkagefdpekwiaslgitsqksceclaetwayclqqtqghpdaslllwrgvemveilstlsmdidtlraallfpladanvvsedvlresvgksvvnlihgvrdmaairqlkathtdsvsseqvdnvrrmllamvddfrcvviklaeriahlrevkdapedervlaakectniyaplanrlgigqlkweledycfrylhpteykriakllherrldrehyieefvghlraemkaegvkaevygrpkhiysiwrkmqkknlafdelfdvravrivaerlqdcyaalgivhthyrhlpdefddyvanpkpngyqsihtvvlgpggktveiqirtkqmhedaelgvaahwkykegaaaggarsghedriawlrkliawqeemadsgemldevrsqvfddrvyvftpkgdvvdlpagstpldfayhihsdvghrcigakiggrivpftyqlqmgdqieiitqkqpnpsrdwlnpnlgyvttsrgrskihawfrkqdrdknilagrqilddelehlgislkeaekhllprynfndvdellaaigggdirlnqmvnflqsqfnkpsaeeqdaaalkqlqqksytpqnrskdngrvvvegvgnlmhhiarccqpipgdeivgfitqgrgisvhradceqlaelrshaperivdavwgesysagyslvvrvvandrsgllrdittilanekvnvlgvasrsdtkqqlatidmtieiynlqvlgrvlgklnqvpdvidarrlhgs]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=relA+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=relA]] | ||
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Latest revision as of 21:43, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
relA |
|---|---|
| Gene Synonym(s) |
ECK2778, b2784, JW2755, RC[1], RC |
| Product Desc. |
ATP:GTP 3'-pyrophosphotransferase, ppGpp synthetase I; required for ppGpp synthesis during stringent response to amino acid starvation; self regulated[4] |
| Product Synonyms(s) |
(p)ppGpp synthetase I/GTP pyrophosphokinase[1], B2784[2][1], RelA[2][1], ppGpp synthase I[2][1] , ECK2778, JW2755, RC, b2784 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): relA-mazEF[2][3], relA-chpRA, chpA |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
RelA has two physically and functionally distinct domains, the N-terminal domain, amino acids 1 to 455, is responsible for (p)ppGpp synthesis, and the C-terminal domain, amino acids 456 to 744, is responsible for self regulation.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.