relA:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G02260 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000024795 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038968 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00014148 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000018036 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-377 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-378 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230182 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0039650 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11268-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000330721 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000006766 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000024331 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1915945 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6ATB4 (score: 1.000; bootstrap: 97%)
  • Q9AYT4 (score: 0.998)
  • Q75IS2 (score: 0.549)
  • Q6ATB2 (score: 0.496)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000012759 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000016445 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000171044 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00034759001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RELA

From SHIGELLACYC

E. coli O157

RELA

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02824 TGS domain

Pfam (EcoliWiki Page)

PF01842 ACT domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:55021

Superfamily (EcoliWiki Page)

SUPERFAMILY:81271

Superfamily (EcoliWiki Page)

SUPERFAMILY:81301

Superfamily (EcoliWiki Page)

SUPERFAMILY:109604

Pfam (EcoliWiki Page)

PF04607 Region found in RelA / SpoT proteins

EcoCyc

EcoCyc:EG10835

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10835

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000826

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0828

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009125

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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