typA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''bipA, ECK3864, b3871, JW5571, yihK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''bipA, ECK3864, b3871, JW5571, yihK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, yihK''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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GTP-binding protein<ref name='LIB:Riley_2006'/>, B3871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BipA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TypA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''GTP-binding protein<ref name='LIB:Riley_2006'/>, B3871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YihK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BipA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TypA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , bipA, ECK3864, JW5571, yihK, b3871''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=typA&loc=MG1655:4056430..4058253,W3110:3578274..3576451,REL606:4036665..4038488 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4036665&end=4038488&gene=typA&aa=mieklrniaiiahvdhgkttlvdkllqqsgtfdsraetqervmdsndlekergitilakntaikwndyrinivdtpghadfggevervmsmvdsvllvvdafdgpmpqtrfvtkkafayglkpivvinkvdrpgarpdwvvdqvfdlfvnldatdeqldfpivyasalngiagldhedmaedmtplyqaivdhvpapdvdldgpfqmqisqldynsyvgvigigrikrgkvkpnqqvtiidsegktrnakvgkvlghlglerietdlaeagdivaitglgelnisdtvcdtqnvealpalsvdeptvsmffcvntspfcgkegkfvtsrqildrlnkelvhnvalrveetedadafrvsgrgelhlsvlienmrregfelavsrpkvifreidgrkqepyenvtldveeqhqgsvmqalgerkgdlknmnpdgkgrvrldyvipsrgligfrsefmtmtsgtgllystfshyddvrpgevgqrqngvlisngqgkavafalfglqdrgklflghgaevyegqiigihsrsndltvncltgkkltnmrasgtdeavvlvppirmtleqalefidddelvevtptsirirkrhltendrrranrapkdd Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=typA+AND+escherichia+coli Pubmed(typA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=typA Textpresso(typA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=typA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11837]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001768&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=typA&loc=MG1655%3A4056430..4058253,W3110%3A3578274..3576451,REL606%3A4036665..4038488,BW2952%3A3946099..3947922]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3946099&end=3947922&gene=typA&aa=mieklrniaiiahvdhgkttlvdkllqqsgtfdsraetqervmdsndlekergitilakntaikwndyrinivdtpghadfggevervmsmvdsvllvvdafdgpmpqtrfvtkkafayglkpivvinkvdrpgarpdwvvdqvfdlfvnldatdeqldfpivyasalngiagldhedmaedmtplyqaivdhvpapdvdldgpfqmqisqldynsyvgvigigrikrgkvkpnqqvtiidsegktrnakvgkvlghlglerietdlaeagdivaitglgelnisdtvcdtqnvealpalsvdeptvsmffcvntspfcgkegkfvtsrqildrlnkelvhnvalrveetedadafrvsgrgelhlsvlienmrregfelavsrpkvifreidgrkqepyenvtldveeqhqgsvmqalgerkgdlknmnpdgkgrvrldyvipsrgligfrsefmtmtsgtgllystfshyddvrpgevgqrqngvlisngqgkavafalfglqdrgklflghgaevyegqiigihsrsndltvncltgkkltnmrasgtdeavvlvppirmtleqalefidddelvevtptsirirkrhltendrrranrapkdd]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=typA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=typA]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

typA

Gene Synonym(s)

bipA, ECK3864, b3871, JW5571, yihK[1][2], yihK

Product Desc.

protein possibly involved in LPS biosynthesis and host colonization[2][3]

GTPase, regulatory, ribosome-associated; phosphorylated protein involved in global gene regulation; non-essential gene[4]

Product Synonyms(s)

GTP-binding protein[1], B3871[2][1], YihK[2][1], BipA[2][1], TypA[2][1] , bipA, ECK3864, JW5571, yihK, b3871

Function from GO

<GO_nr />

Knock-Out Phenotype

failure to grow at low temperatures[5]

Regulation/Expression

transcription unit(s): bipA[2]

Regulation/Activity

test2

Quick Links



        

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Pfennig, PL & Flower, AM (2001) BipA is required for growth of Escherichia coi K12 at low temperature. Mol. Genet. Genomics 266 313-7 PubMed