fnr:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional dual regulator, global regulator of anaerobic growth<ref name='LIB:Riley_2006'/>, B1334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fnr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OssA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulation of aerobic, anaerobic respiration, osmotic balance<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OxrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional dual regulator, global regulator of anaerobic growth<ref name='LIB:Riley_2006'/>, B1334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fnr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OssA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulation of aerobic, anaerobic respiration, osmotic balance<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OxrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1330, JW1328, nirA, nirR, ossA, b1334''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=fnr&loc=MG1655:1397550..1396798,W3110:1401240..1400488,DH10B:1486946..1486194,REL606:1396696..1395944 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1396696&end=1395944&gene=fnr&aa=mipekriirriqsggcaihcqdcsisqlcipftlneheldqldniierkkpiqkgqtlfkagdelkslyairsgtiksytiteqgdeqitgfhlagdlvgfdaigsghhpsfaqaletsmvceipfetlddlsgkmpnlrqqmmrlmsgeikgdqdmilllskknaeerlaafiynlsrrfaqrgfsprefrltmtrgdignylgltvetisrllgrfqksgmlavkgkyitienndalaqlaghtrnva Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fnr+AND+escherichia+coli Pubmed(fnr)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=fnr Textpresso(fnr)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fnr&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10325]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000319&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fnr&loc=MG1655%3A1397550..1396798,W3110%3A1401240..1400488,DH10B%3A1486946..1486194,REL606%3A1396696..1395944,BW2952%3A1287647..1288399]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1287647&end=1288399&gene=fnr&aa=mipekriirriqsggcaihcqdcsisqlcipftlneheldqldniierkkpiqkgqtlfkagdelkslyairsgtiksytiteqgdeqitgfhlagdlvgfdaigsghhpsfaqaletsmvceipfetlddlsgkmpnlrqqmmrlmsgeikgdqdmilllskknaeerlaafiynlsrrfaqrgfsprefrltmtrgdignylgltvetisrllgrfqksgmlavkgkyitienndalaqlaghtrnva]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fnr+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fnr]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fnr

Gene Synonym(s)

ECK1330, b1334, JW1328, nirA, nirR, ossA, oxrA[1][2]

Product Desc.

FNR transcriptional dual regulator[2][3]

Global transcription factor for anaerobic growth; [4FE-4S] cluster; homodimeric[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator, global regulator of anaerobic growth[1], B1334[2][1], Fnr[2][1], OssA[2][1], NirR[2][1], NirA[2][1], transcriptional regulation of aerobic, anaerobic respiration, osmotic balance[2][1], OxrA[2][1] , ECK1330, JW1328, nirA, nirR, ossA, b1334

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fnr[2], OP00029

Regulation/Activity
Quick Links



        

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Notes

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FNR represses genes involved in aerobic respiration and activates genes required for anaerobic respiration.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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