trg:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="Q49b027237c394"  class=" tableEdit New_Quickview_Table"   
{|   id="Q49b027237c394"  class=" tableEdit New_Quickview_Table"   


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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''trg''  
''trg''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1415, b1421, JW1417''<ref name='LIB:Riley_2006'/>
''ECK1415, b1421, JW1417''<ref name='LIB:Riley_2006'/>, JW1417''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor<ref name='LIB:Riley_2006'/>, B1421<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Trg<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor<ref name='LIB:Riley_2006'/>, B1421<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Trg<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1415, JW1417, b1421''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=trg&loc=MG1655:1490494..1492134,W3110:1494184..1495824,DH10B:1581089..1582729,REL606:1462579..1464219 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1462579&end=1464219&gene=trg&aa=mnttpsqrlgflhhirlvplfacilggilvlfalssalagyflwqadrdqrdvtaeieirtglanssdflrsarinmiqagaasriaemeamkrniaqaeseikqsqqgyrayqnrpvktpadealdtelnqrfqayitgmqpmlkyakngmfeaiinheseqirpldnaytdilnkavkirstranqlaelahqrtrlggmfmigafvlalvmtlitfmvlrrivirplqhaaqriekiasgdltmndepagrneigrlsrhlqqmqhslgmtvgtvrqgaeeiyrgtseisagnadlssrteeqaaaieqtaasmeqltatvkqnadnahhasklaqeasikasdggqtvsgvvktmgaistsskkiseitavinsiafqtnilalnaaveaarageqgrgfavvasevrtlasrsaqaakeieglisesvrlidlgsdevatagktmstivdavasvthimqeiaaasdeqsrgitqvsqaisemdkvtqqnaslveeasaaavsleeqaarlteavdvfrlhkhsvsaeprgagepvsfatv Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=trg+AND+escherichia+coli Pubmed(trg)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=trg Textpresso(trg)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=trg&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11018]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001007&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=trg&loc=MG1655%3A1490494..1492134,W3110%3A1494184..1495824,DH10B%3A1581089..1582729,REL606%3A1462579..1464219,BW2952%3A1382553..1384193]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1382553&end=1384193&gene=trg&aa=mnttpsqrlgflhhirlvplfacilggilvlfalssalagyflwqadrdqrdvtaeieirtglanssdflrsarinmiqagaasriaemeamkrniaqaeseikqsqqgyrayqnrpvktpadealdtelnqrfqayitgmqpmlkyakngmfeaiinheseqirpldnaytdilnkavkirstranqlaelahqrtrlggmfmigafvlalvmtlitfmvlrrivirplqhaaqriekiasgdltmndepagrneigrlsrhlqqmqhslgmtvgtvrqgaeeiyrgtseisagnadlssrteeqaaaieqtaasmeqltatvkqnadnahhasklaqeasikasdggqtvsgvvktmgaistsskkiseitavinsiafqtnilalnaaveaarageqgrgfavvasevrtlasrsaqaakeieglisesvrlidlgsdevatagktmstivdavasvthimqeiaaasdeqsrgitqvsqaisemdkvtqqnaslveeasaaavsleeqaarlteavdvfrlhkhsvsaeprgagepvsfatv]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=trg+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=trg]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

trg

Gene Synonym(s)

ECK1415, b1421, JW1417[1], JW1417

Product Desc.

Trg[2][3];

Component of MCP-III[2][3]

Ribose, galactose chemoreceptor, methyl-accepting; MCP III; flagellar regulon[4]

Product Synonyms(s)

methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor[1], B1421[2][1], Trg[2][1] , ECK1415, JW1417, b1421

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): trg[2]

Regulation/Activity
Quick Links



        

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Notes

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Trg senses ribose and galactose indirectly through their periplasmic binding proteins. Trg is a low-abundance chemoreceptor, 5- 10-fold lower than Tar and Tsr. Trg can function as a warm receptor during thermotaxis. Trg senses low pH as an attractant and phenol as a repellent.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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